RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 KRT77Q7Z794 578 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF679Q8IYX0 411 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF808Q8N4W9 903 aaPredicted RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 WDR31Q8NA23 367 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF485Q8NCK3 441 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 FGFBP3Q8TAT2 258 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 SNX33Q8WV41 574 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 FCGR1BQ92637 280 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 LRRC46Q96FV0 321 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 OR2H1Q9GZK4 316 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 WNT5BQ9H1J7 359 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 MOV10Q9HCE1 1003 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 DDX28Q9NUL7 540 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 LSM2Q9Y333 95 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 C16orf97H3BN30 126 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ABHD16AO95870 558 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 PTHP01270 115 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 MT-ND5P03915 603 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 KRT8P05787 483 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 PATE4P0C8F1 98 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 COX5BP10606 129 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 JUNBP17275 347 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 HOXC12P31275 282 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 DCTDP32321 178 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 UGT2B10P36537 528 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 MAP2K4P45985 399 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 RAB1AP62820 205 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 FAM27E3Q08E93 113 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ECH1Q13011 328 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 GSG1Q2KHT4 349 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 OR2G6Q5TZ20 316 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 UBE2UQ5VVX9 321 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 KCTD8Q6ZWB6 473 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 VASH1Q7L8A9 365 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ALDH16A1Q8IZ83 802 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 COQ7Q99807 217 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 MROQ9BYG7 248 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 NIPAL2Q9H841 368 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 RNF121Q9H920 327 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 ISYNA1Q9NPH2 558 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 KCNJ16Q9NPI9 418 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 SLCO1C1Q9NYB5 712 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 SCOCQ9UIL1 159 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 FBXL3Q9UKT7 428 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
PRPF18-201ENST00000320054 RTTNQ86VV8 2226 aa11.87□□□□□ -0.51
PRPF18-201ENST00000320054 SPTBN1Q01082 2364 aaKnown RBP11.86□□□□□ -0.51
PRPF18-201ENST00000320054 OR6C6A6NF89 314 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 J3QLW9 94 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 SYNGR3O43761 229 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 DOK2O60496 412 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 CLPTM1O96005 669 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 WNT11O96014 354 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 H2BFMP0C1H6 154 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 CD79AP11912 226 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 PPP3CBP16298 524 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF19P17023 458 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 RIDAP52758 137 aaKnown RBP11.86□□□□□ -0.51
PRPF18-201ENST00000320054 OR12D2P58182 307 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 SPHARQ15513 63 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 TP53I3Q53FA7 332 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 PABPC1L2AQ5JQF8 200 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 XAF1Q6GPH4 301 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF367Q7RTV3 350 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 FAM220AQ7Z4H9 259 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 MDP1Q86V88 176 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 OR1F12Q8NHA8 337 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 SPRYD4Q8WW59 207 aaPredicted RBP11.86□□□□□ -0.51
PRPF18-201ENST00000320054 HSD17B8Q92506 261 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 S100PBPQ96BU1 408 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF75AQ96N20 296 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ATF6BQ99941 703 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 TTTY10Q9BZA0 68 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ISG20L2Q9H9L3 353 aaKnown RBP11.86□□□□□ -0.51
PRPF18-201ENST00000320054 ELOVL3Q9HB03 270 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms