RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MAP3K3Q99759 626 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 SHARPINQ9H0F6 387 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 IL21Q9HBE4 155 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 MBNL1Q9NR56 388 aaKnown RBP6.84□□□□□ -1.31
CDHR3-201ENST00000317716 LRIT1Q9P2V4 623 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 HHLA2Q9UM44 414 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 PIAS3Q9Y6X2 628 aa6.84□□□□□ -1.31
CDHR3-201ENST00000317716 ANKRD20A5PA0PJZ0 165 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TUBAL3A6NHL2 446 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 RNASEK-C17orf49H0YIS7 233 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PPP1R2P9O14990 202 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SNAPC5O75971 98 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 OR2C1O95371 312 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TAGLN2P37802 199 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 DIO1P49895 249 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 CYCSP99999 105 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 IKZF1Q13422 519 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 RUNX3Q13761 415 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ELOCQ15369 112 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 LILRA6Q6PI73 481 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 FAM181AQ8N9Y4 354 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ZPLD1Q8TCW7 415 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 MITD1Q8WV92 249 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ROBO4Q8WZ75 1007 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PBDC1Q9BVG4 233 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 BCL2L10Q9HD36 194 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 LANCL2Q9NS86 450 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 LRFN1Q9P244 771 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 DHCR7Q9UBM7 475 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 DSPPQ9NZW4 1301 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 A0A1W2PPE2 198 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 DNASE2O00115 360 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SULT1B1O43704 296 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 KLF8O95600 359 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 IFNA2P01563 188 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 HLA-DQB1P01920 261 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 HNRNPA1P09651 372 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 MDKP21741 143 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 RFC3P40938 356 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PCBP4P57723 403 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 MESP2Q0VG99 397 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NR0B2Q15466 257 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PHLDA2Q53GA4 152 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 DMKNQ6E0U4 476 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ZNF765Q7L2R6 523 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SLC16A9Q7RTY1 509 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PRSS41Q7RTY9 318 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 MDGA2Q7Z553 956 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NECAP1Q8NC96 275 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 OR6S1Q8NH40 331 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 FRZBQ92765 325 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ZNF775Q96BV0 537 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PLA2G2FQ9BZM2 168 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SLC19A3Q9BZV2 496 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NELFAQ9H3P2 528 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 UQCC1Q9NVA1 299 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TMED7Q9Y3B3 224 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 VWA8A3KMH1 1905 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 FAM221AA4D161 298 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 PRRT4C9JH25 899 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 P2RX6O15547 441 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ZGLP1P0C6A0 271 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 RNF224P0DH78 156 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NR2C1P13056 603 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TSFMP43897 325 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 RASGEF1BQ0VAM2 473 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TMEM182Q6ZP80 229 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 C12orf40Q86WS4 652 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 TMEM123Q8N131 208 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SPICQ8N5J4 248 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 OR2G2Q8NGZ5 317 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SLC22A18Q96BI1 424 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 LYSMD1Q96S90 227 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SLC25A21Q9BQT8 299 aaPredicted RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 FOXQ1Q9C009 403 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 SLC5A7Q9GZV3 580 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 MTFP1Q9UDX5 166 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 ICKQ9UPZ9 632 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 EXOGQ9Y2C4 368 aaKnown RBP6.83□□□□□ -1.32
CDHR3-201ENST00000317716 KCNIP3Q9Y2W7 256 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
CDHR3-201ENST00000317716 FNDC1Q4ZHG4 1894 aaPredicted RBP6.82□□□□□ -1.32
CDHR3-201ENST00000317716 IGLV3-16A0A075B6K0 115 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 TRAV1-2A0A0B4J238 106 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 F5H5K5 113 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 GLCEO94923 617 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 IGHA1P01876 353 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 S100A8P05109 93 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 IL5P05113 134 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 GP1BAP07359 652 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 TACR3P29371 465 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 F2RL1P55085 397 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 NANOS3P60323 173 aaKnown RBP6.82□□□□□ -1.32
CDHR3-201ENST00000317716 PRPS1P60891 318 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 BDH1Q02338 343 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 MEF2DQ14814 521 aa6.82□□□□□ -1.32
CDHR3-201ENST00000317716 RPL7L1Q6DKI1 246 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms