RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RORAP35398 523 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 DNASE1L1P49184 302 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 ARRB1P49407 418 aaPredicted RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 PPP1R1AQ13522 171 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 OR10K2Q6IF99 312 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 RAB12Q6IQ22 244 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 C3orf33Q6P1S2 294 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 METTL27Q8N6F8 245 aaPredicted RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 OR13C3Q8NGS6 347 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 CST11Q9H112 138 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 G6PC2Q9NQR9 355 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 GDF2Q9UK05 429 aaPredicted RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 CTHP32929 405 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 INPP5JQ15735 1006 aaPredicted RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 LRRC37A5PQ49AS3 106 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 RNASE10Q5GAN6 216 aaKnown RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 BEX5Q5H9J7 111 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 PRAMEF17Q5VTA0 474 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 JAGN1Q8N5M9 183 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 FOXRED1Q96CU9 486 aaPredicted RBP17.12■□□□□ 0.33
RTN4-201ENST00000317610 LANCL2Q9NS86 450 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 PLEKHA6Q9Y2H5 1048 aa17.12■□□□□ 0.33
RTN4-201ENST00000317610 F5P12259 2224 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 LOC107986453A0A1B0GWG9 222 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 A0A1W2PQD3 144 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 FITM1A5D6W6 292 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 H0YIG0 161 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 RAB27BO00194 218 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 SMAD9O15198 467 aaKnown RBP17.11■□□□□ 0.33
RTN4-201ENST00000317610 FGF16O43320 207 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 SLC25A12O75746 678 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 WISP1O95388 367 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 CXADRP78310 365 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 POMZP3Q6PJE2 187 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 FJX1Q86VR8 437 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 OR4D6Q8NGJ1 314 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 SLC25A36Q96CQ1 311 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 DNAJA3Q96EY1 480 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 MAP3K3Q99759 626 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 RAB22AQ9UL26 194 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 PCDHB10Q9UN67 800 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 ZNF175Q9Y473 711 aa17.11■□□□□ 0.33
RTN4-201ENST00000317610 KIAA0100Q14667 2235 aaKnown RBP17.11■□□□□ 0.33
RTN4-201ENST00000317610 IGKV3-11P04433 115 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 NKPD1Q17RQ9 610 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 PRR22Q8IZ63 422 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 OR1S2Q8NGQ3 325 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 STOML3Q8TAV4 291 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 PHB2Q99623 299 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 PNO1Q9NRX1 252 aaKnown RBP17.1■□□□□ 0.33
RTN4-201ENST00000317610 EMC9Q9Y3B6 208 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 DNAH14Q0VDD8 3507 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CDH23Q9H251 3354 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 TMEM218A2RU14 115 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 PRAMEF26H0Y7S4 382 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 LIPCP11150 499 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CD1CP29017 333 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 BDKRB2P30411 391 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 PRKXP51817 358 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CDNFQ49AH0 187 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 TMEM92Q6UXU6 159 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 ZNF813Q6ZN06 617 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CD163Q86VB7 1156 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 ACBD4Q8NC06 268 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 THAP6Q8TBB0 222 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 MYEF2Q9P2K5 600 aaKnown RBP17.1■□□□□ 0.33
RTN4-201ENST00000317610 OR52A1Q9UKL2 312 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 TMED7Q9Y3B3 224 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 TRANK1O15050 2925 aa17.1■□□□□ 0.33
RTN4-201ENST00000317610 SPTY2D1-AS1A0A0U1RR47 76 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 METTL21EPA6NDL7 271 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 C17orf51A8MQB3 221 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 ALG1L2C9J202 215 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 F8VVB4 439 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 F8VWA3 439 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 EIF1AYO14602 144 aaKnown RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 GMFGO60234 142 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 CSN2P05814 226 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 GP1BBP13224 206 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 PGCP20142 388 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 CRABP1P29762 137 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 EIF1AXP47813 144 aaKnown RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 ARHGDIBP52566 201 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 GLO1Q04760 184 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 FZD2Q14332 565 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 ATXN7L3Q14CW9 347 aaPredicted RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 ZNF704Q6ZNC4 412 aaPredicted RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 TRAPPC6BQ86SZ2 158 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 TMEM151BQ8IW70 566 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 OR8D2Q9GZM6 311 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 NDRG3Q9UGV2 375 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 MMACHCQ9Y4U1 282 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 COL5A1P20908 1838 aaPredicted RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 F5H0A9 414 aaPredicted RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 PLPP3O14495 311 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms