RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 RAET1LQ5VY80 246 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 GPR148Q8TDV2 347 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 RBPMSQ93062 196 aaKnown RBP11.08□□□□□ -0.64
RNF4-201ENST00000314289 NXT1Q9UKK6 140 aaKnown RBP11.08□□□□□ -0.64
RNF4-201ENST00000314289 MAB21L2Q9Y586 359 aa11.08□□□□□ -0.64
RNF4-201ENST00000314289 PCDHGA9Q9Y5G4 932 aaKnown RBP11.08□□□□□ -0.64
RNF4-201ENST00000314289 LOC102723996A0A087X1L8 192 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ATP6V1G2-DDX39BF2Z307 99 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RRASP10301 218 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 DNASE1L1P49184 302 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 SUMO3P55854 103 aaPredicted RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 DMRTC1Q5HYR2 192 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 ZBTB44Q8NCP5 570 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SYNPRQ8TBG9 265 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 PTGES2Q9H7Z7 377 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ABRACLQ9P1F3 81 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 MEIKINA0A087WXM9 373 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 TP53I11O14683 189 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 ZNF208O43345 1280 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 DPP4P27487 766 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 MAP2K6P52564 334 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ZP1P60852 638 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 DCAF12Q5T6F0 453 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ASPHD2Q6ICH7 369 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 FAAP20Q6NZ36 180 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 LRRTM1Q86UE6 522 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 OR52N5Q8NH56 324 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ZC4H2Q9NQZ6 224 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 NCOA6Q14686 2063 aaPredicted RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 MED13Q9UHV7 2174 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 TMEM212A6NML5 194 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SULT2B1O00204 365 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RGS11O94810 467 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SLC2A1P11166 492 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RIDAP52758 137 aaKnown RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 Q0VFX4 171 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SNTB2Q13425 540 aaKnown RBP11.07□□□□□ -0.64
RNF4-201ENST00000314289 TRA2AQ13595 282 aaKnown RBP eCLIP11.07□□□□□ -0.64
RNF4-201ENST00000314289 RAB11FIP2Q7L804 512 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 UEVLDQ8IX04 471 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 OR51D1Q8NGF3 324 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ADAMTS14Q8WXS8 1223 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SLITRK2Q9H156 845 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 PROK2Q9HC23 129 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 HPF1Q9NWY4 346 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 SCP2D1Q9UJQ7 156 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 PADI1Q9ULC6 663 aa11.07□□□□□ -0.64
RNF4-201ENST00000314289 RIF1Q5UIP0 2472 aaKnown RBP11.06□□□□□ -0.64
RNF4-201ENST00000314289 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 A0A1B0GVI7 797 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ZNF254O75437 659 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 IGHMP01871 453 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ALDOBP05062 364 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 SULT1A3P0DMM9 295 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 SULT1A4P0DMN0 295 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 CTRB1P17538 263 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 SSR4P51571 173 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 EFNB2P52799 333 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 BLVRAP53004 296 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 CLRN1P58418 232 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 CTRB2Q6GPI1 263 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 KCTD18Q6PI47 426 aaPredicted RBP11.06□□□□□ -0.64
RNF4-201ENST00000314289 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 NLRC3Q7RTR2 1065 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 OR51A2Q8NGJ7 313 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 RNF128Q8TEB7 428 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 LINC00052Q96N35 136 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 UCN2Q96RP3 112 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 GSX2Q9BZM3 304 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
RNF4-201ENST00000314289 B3GNT4Q9C0J1 378 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ZNF700Q9H0M5 742 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 TRIM77I1YAP6 450 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 PDCD5O14737 125 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 UBL3O95164 117 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 CD1AP06126 327 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 ANOS1P23352 680 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 MSX1P28360 303 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 UBE2NLQ5JXB2 153 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 C20orf85Q9H1P6 137 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 OR10A4Q9H209 315 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 PTTG3PQ9NZH4 202 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 DNAJC13O75165 2243 aa11.06□□□□□ -0.64
RNF4-201ENST00000314289 TMEM269A0A1B0GVZ9 245 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 DCDC2BA2VCK2 349 aa11.05□□□□□ -0.64
RNF4-201ENST00000314289 ITGA5P08648 1049 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms