RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 IGHV4-39P01824 125 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 TP53P04637 393 aaPredicted RBP17.07■□□□□ 0.32
VEGFB-201ENST00000309422 SCG5P05408 212 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 TUBG1P23258 451 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 ENTPD1P49961 510 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 DAPP51397 102 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 TAF13Q15543 124 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 KLHL12Q53G59 568 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 ZMAT1Q5H9K5 638 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 LCN1P1Q5VSP4 162 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 TMEM154Q6P9G4 183 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 LINC00346Q8IVM7 164 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 SPTSSAQ969W0 71 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 ATF6BQ99941 703 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 RHNO1Q9BSD3 238 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 MRPL37Q9BZE1 423 aaKnown RBP17.07■□□□□ 0.32
VEGFB-201ENST00000309422 OR51V1Q9H2C8 321 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 TUBG2Q9NRH3 451 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 GDF2Q9UK05 429 aaPredicted RBP17.07■□□□□ 0.32
VEGFB-201ENST00000309422 GRIP1Q9Y3R0 1128 aa17.07■□□□□ 0.32
VEGFB-201ENST00000309422 ALPK2Q86TB3 2170 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 LOC100509620A0A075B734 347 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 J3QW42 95 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 SURF4O15260 269 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 GYPBP06028 91 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 PPP1CBP62140 327 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 GABPB1Q06547 395 aaPredicted RBP17.06■□□□□ 0.32
VEGFB-201ENST00000309422 OTPQ5XKR4 325 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 PLBD1Q6P4A8 553 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 CORO6Q6QEF8 472 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 NEU4Q8WWR8 484 aaPredicted RBP17.06■□□□□ 0.32
VEGFB-201ENST00000309422 INTS14Q96SY0 518 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 TBCCD1Q9NVR7 557 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 TVP23BQ9NYZ1 205 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 CGGBP1Q9UFW8 167 aaPredicted RBP17.06■□□□□ 0.32
VEGFB-201ENST00000309422 LHFPL6Q9Y693 200 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 COMMD3-BMI1R4GMX3 469 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 PRR14LQ5THK1 2151 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 OTOGQ6ZRI0 2925 aa17.06■□□□□ 0.32
VEGFB-201ENST00000309422 TVP23AA6NH52 213 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 FAM183AA6NL82 134 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 PRODHO43272 600 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 TFP02787 698 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 GSTT1P30711 240 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 CDK5Q00535 292 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 CARTPTQ16568 116 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 SLC18B1Q6NT16 456 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 ERI1Q8IV48 349 aaKnown RBP17.05■□□□□ 0.32
VEGFB-201ENST00000309422 COPS4Q9BT78 406 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 CYSLTR2Q9NS75 346 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 H2AFY2Q9P0M6 372 aaPredicted RBP17.05■□□□□ 0.32
VEGFB-201ENST00000309422 TAAR3PQ9P1P4 343 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 CYB5R1Q9UHQ9 305 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 CADP27708 2225 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 ROS1P08922 2347 aa17.05■□□□□ 0.32
VEGFB-201ENST00000309422 GLCEO94923 617 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 ADRA2AP08913 450 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 SLC15A1P46059 708 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 PDLIM4P50479 330 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 RAD23AP54725 363 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 TPTEP56180 551 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 PTGES3Q15185 160 aaKnown RBP17.04■□□□□ 0.32
VEGFB-201ENST00000309422 MST1LQ2TV78 715 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 CCDC92Q53HC0 331 aaPredicted RBP17.04■□□□□ 0.32
VEGFB-201ENST00000309422 SLC35D3Q5M8T2 416 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 SPATA46Q5T0L3 261 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 KDM4DQ6B0I6 523 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 ACSM5Q6NUN0 579 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 RFPL4BQ6ZWI9 263 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 CXXC5Q7LFL8 322 aaKnown RBP17.04■□□□□ 0.32
VEGFB-201ENST00000309422 SHFQ7M4L6 423 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 OR6N2Q8NGY6 317 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 DOK1Q99704 481 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 NMNAT2Q9BZQ4 307 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 RIBC2Q9H4K1 309 aa17.04■□□□□ 0.32
VEGFB-201ENST00000309422 F5H5K5 113 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 TPD52L2O43399 206 aaKnown RBP17.03■□□□□ 0.32
VEGFB-201ENST00000309422 ICMTO60725 284 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 F12P00748 615 aaPredicted RBP17.03■□□□□ 0.32
VEGFB-201ENST00000309422 FOSL1P15407 271 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 ZNF250P15622 560 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 LIPAP38571 399 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 WNT5AP41221 380 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 SLC6A9P48067 706 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 MALLQ13021 153 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 ZSCAN26Q16670 478 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 ZNF101Q8IZC7 436 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 SLC25A40Q8TBP6 338 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 FAM168AQ92567 244 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 APOBEC3DQ96AK3 386 aaPredicted RBP17.03■□□□□ 0.32
VEGFB-201ENST00000309422 SORCS2Q96PQ0 1159 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 DDOQ99489 341 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 CIB1Q99828 191 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 PKP2Q99959 881 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 PIMREGQ9BSJ6 248 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 C9orf16Q9BUW7 83 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 OR2J1Q9GZK6 312 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 S100A14Q9HCY8 104 aa17.03■□□□□ 0.32
VEGFB-201ENST00000309422 MRPL22Q9NWU5 206 aaKnown RBP17.03■□□□□ 0.32
VEGFB-201ENST00000309422 ZNF593O00488 134 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms