RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MCUR1Q96AQ8 359 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 BEX2Q9BXY8 128 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 SHARPINQ9H0F6 387 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 KRCC1Q9NPI7 259 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 GPR160Q9UJ42 338 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 OR6C68A6NDL8 312 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 TFP02787 698 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 DBHP09172 617 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 GCH1P30793 250 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 SLC6A6P31641 620 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 ERFP50548 548 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 ZNF81P51508 661 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 CR1LQ2VPA4 569 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 KRTAP27-1Q3LI81 207 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 FAM209AQ5JX71 171 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 Q6ZR03 302 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 USP51Q70EK9 711 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 ARHGAP24Q8N264 748 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 SLC26A10Q8NG04 563 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 OR8D4Q8NGM9 314 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 OR4K13Q8NH42 304 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 PLA2G12AQ9BZM1 189 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 RERGLQ9H628 205 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 ELOVL3Q9HB03 270 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 PLEK2Q9NYT0 353 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 ATPIF1Q9UII2 106 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 STARD10Q9Y365 291 aa16.83■□□□□ 0.28
PDZRN3-202ENST00000308537 DYSFO75923 2080 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 IGHV1-69-2A0A0G2JMI3 117 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 BHLHE40O14503 412 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 UBOX5O94941 541 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 ABHD16AO95870 558 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 CD55P08174 381 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 COX10Q12887 443 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 MOGQ16653 247 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 TSTQ16762 297 aaKnown RBP16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 MTX3Q5HYI7 312 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 LEG1Q6P5S2 330 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 NPEPL1Q8NDH3 523 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 OR1F12Q8NHA8 337 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 TRIM15Q9C019 465 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 NARFLQ9H6Q4 476 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 EGLN3Q9H6Z9 239 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 IL20Q9NYY1 176 aa16.82■□□□□ 0.28
PDZRN3-202ENST00000308537 PPIHO43447 177 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 SPRY3O43610 288 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 DEAF1O75398 565 aaPredicted RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 KRT36O76013 467 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 KITLGP21583 273 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 CALB2P22676 271 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 CRABP1P29762 137 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 THBS2P35442 1172 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 RBMXP38159 391 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 PPP1R8Q12972 351 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 UNQ6126/PRO20091Q6UXV3 157 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 BCAS4Q8TDM0 211 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 GNPDA2Q8TDQ7 276 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 ZNRF4Q8WWF5 429 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 IFT27Q9BW83 186 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 FN3KQ9H479 309 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 MAGIXQ9H6Y5 334 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 SAP30LQ9HAJ7 183 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 MSL2Q9HCI7 577 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 SRA1Q9HD15 236 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 MRPL22Q9NWU5 206 aaKnown RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 DCAF16Q9NXF7 216 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 TREM2Q9NZC2 230 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 CGGBP1Q9UFW8 167 aaPredicted RBP16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 CDH10Q9Y6N8 788 aa16.81■□□□□ 0.28
PDZRN3-202ENST00000308537 ACOT8O14734 319 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 IDH3BO43837 385 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 GASTP01350 101 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 PSKH1P11801 424 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 GGT2P36268 569 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 DVL1P1P54792 670 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 CDK5R2Q13319 367 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 AVPI1Q5T686 147 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 CORO6Q6QEF8 472 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 SDR9C7Q8NEX9 313 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 CLPTM1LQ96KA5 538 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 MUC13Q9H3R2 512 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 PNRC2Q9NPJ4 139 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 RPRD1BQ9NQG5 326 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 PURGQ9UJV8 347 aaKnown RBP16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 TMCC3Q9ULS5 477 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 WIPI2Q9Y4P8 454 aa16.8■□□□□ 0.28
PDZRN3-202ENST00000308537 B4DSR2 109 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 TNFRSF11BO00300 401 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 IFNA2P01563 188 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 TUBG1P23258 451 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 IFNGR2P38484 337 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 ARHGDIAP52565 204 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 SLC18B1Q6NT16 456 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 CFAP77Q6ZQR2 320 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 COLCA1Q6ZS62 124 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 PHC2Q8IXK0 858 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 HAVCR1Q96D42 359 aa16.79■□□□□ 0.28
PDZRN3-202ENST00000308537 CMBLQ96DG6 245 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms