RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 GTPBP8Q8N3Z3 284 aaPredicted RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 MFSD4AQ8N468 514 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 LIPHQ8WWY8 451 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 C12orf10Q9HB07 376 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF286AQ9HBT8 521 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 TDRD6O60522 2096 aaKnown RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SCN5AQ14524 2016 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ARID1AO14497 2285 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 IGHV3-15A0A0B4J1V0 119 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 BHLHE40O14503 412 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 TNFSF15O95150 251 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 BPNT1O95861 308 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 C11orf91Q3C1V1 193 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 CLVS2Q5SYC1 327 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF546Q86UE3 836 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF695Q8IW36 515 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 PLPP5Q8NEB5 264 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR51S1Q8NGJ8 323 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZFAND1Q8TCF1 268 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 MENTQ9BUN1 341 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ALPK2Q86TB3 2170 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 CENPVL1A0A0U1RR11 272 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 A0A1B0GTQ1 180 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ARGFXA6NJG6 315 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 M0R135 149 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 LPLP06858 475 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 HOXB5P09067 269 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 FAPQ12884 760 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC9A3R2Q15599 337 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC25A30Q5SVS4 291 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 MEX3BQ6ZN04 569 aaKnown RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SEMA6DQ8NFY4 1073 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SCGB1C1Q8TD33 95 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF799Q96GE5 643 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 TAAR9Q96RI9 348 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 SEC22CQ9BRL7 303 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 BANF2Q9H503 90 aa10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 GDF2Q9UK05 429 aaPredicted RBP10.31□□□□□ -0.76
PCDHGC3-201ENST00000308177 E9PI62 339 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 DHHO43323 396 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZFPL1O95159 310 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SERPINE2P07093 398 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 IRF2P14316 349 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF136P52737 540 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 C2orf76Q3KRA6 126 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 CD276Q5ZPR3 534 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PTPMT1Q8WUK0 201 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 KCNE4Q8WWG9 221 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PSMF1Q92530 271 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 OBP2BQ9NPH6 170 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 KLF13Q9Y2Y9 288 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PRICKLE3O43900 615 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 TK1P04183 234 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 RAC2P15153 192 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 UQCRC1P31930 480 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 DSCR4P56555 118 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SORDQ00796 357 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 GK2Q14410 553 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 TOMM34Q15785 309 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PPP1R35Q8TAP8 253 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 IL1F10Q8WWZ1 152 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 C11orf40Q8WZ69 217 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SCARF2Q96GP6 870 aaPredicted RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 TSPAN32Q96QS1 320 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 PBOV1Q9GZY1 135 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZCCHC4Q9H5U6 513 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 CYSLTR2Q9NS75 346 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 EP400Q96L91 3159 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 GVINP1Q7Z2Y8 2422 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 IFNA5P01569 189 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SEMG1P04279 462 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ELP2Q6IA86 826 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 DND1Q8IYX4 353 aaKnown RBP10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF321PQ8N8H1 164 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 C17orf47Q8NEP4 570 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 C17orf50Q8WW18 174 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 WDFY2Q96P53 400 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 SPACA5Q96QH8 159 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 TRAPPC4Q9Y296 219 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 DTX4Q9Y2E6 619 aa10.3□□□□□ -0.76
PCDHGC3-201ENST00000308177 C4orf51C9J302 202 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF780AO75290 641 aaPredicted RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC34A2O95436 690 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 APOC3P02656 99 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 GUSBP08236 651 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ATG4DQ86TL0 474 aaPredicted RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 STX12Q86Y82 276 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 NAXDQ8IW45 347 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 NUBPLQ8TB37 319 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 PTP4A1Q93096 173 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms