RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FBXL3Q9UKT7 428 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 FLVCR1Q9Y5Y0 555 aa10.52□□□□□ -0.73
TRIM40-205ENST00000307859 A6NL46 340 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 KLRC4-KLRK1H3BQV0 150 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PYCARD-AS1I3L0S3 204 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PDCD5O14737 125 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CELA3AP09093 270 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 OCM2P0CE71 109 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CD46P15529 392 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 ATF1P18846 271 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CDAP32320 146 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 RFC3P40938 356 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 MAGEB1P43366 347 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 EIF1AXP47813 144 aaKnown RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 MEOX1P50221 254 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 LHX2P50458 406 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 UCNP55089 124 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 RIN1Q13671 783 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PHYHD1Q5SRE7 291 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PDSS1Q5T2R2 415 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 FAM131AQ6UXB0 335 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 RHOUQ7L0Q8 258 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SYT9Q86SS6 491 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 C20orf196Q8IYI0 205 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 GDPD1Q8N9F7 314 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 ZFP62Q8NB50 900 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 OR10S1Q8NGN2 331 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 OR6N1Q8NGY5 312 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 OR10AC1Q8NH08 325 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 GFI1Q99684 422 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SEC61A2Q9H9S3 476 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 EMC7Q9NPA0 242 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 ABRACLQ9P1F3 81 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 GDF2Q9UK05 429 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SLC22A13Q9Y226 551 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 FAM166BA8MTA8 275 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CYTIPO60759 359 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 H2BFMP0C1H6 154 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 OCMP0CE72 109 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PRKAR1AP10644 381 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SLC2A2P11168 524 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 MAGEA5P43359 124 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SELENOPP49908 381 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 MMP16P51512 607 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CLDN18P56856 261 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 LSM6P62312 80 aaKnown RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PLGLB1Q02325 96 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CLN3Q13286 438 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 TRIM16LQ309B1 348 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 CFAP77Q6ZQR2 320 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 LRRC28Q86X40 367 aaPredicted RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 RDH10Q8IZV5 341 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 ORAI1Q96D31 301 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SLITRK2Q9H156 845 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 SLC25A18Q9H1K4 315 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 PPP1R3EQ9H7J1 279 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 TIGARQ9NQ88 270 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 G6PC2Q9NQR9 355 aa10.51□□□□□ -0.73
TRIM40-205ENST00000307859 AK6Q9Y3D8 172 aaKnown RBP10.51□□□□□ -0.73
TRIM40-205ENST00000307859 hCG_2014768A0A024R1R8 64 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ZNF878C9JN71 531 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 MAGEB3O15480 346 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 DHHO43323 396 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ISG15P05161 165 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ZNF708P17019 499 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ELK1P19419 428 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 MSR1P21757 451 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 SOX2P48431 317 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ARG2P78540 354 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 BCL2A1Q16548 175 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 LRRTM1Q86UE6 522 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 SLC22A16Q86VW1 577 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 SPACA3Q8IXA5 215 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 OR51A4Q8NGJ6 313 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 OR2AJ1Q8NGZ0 328 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 TRMT10AQ8TBZ6 339 aaKnown RBP10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ROBO4Q8WZ75 1007 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 NABP1Q96AH0 204 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 SLC6A15Q9H2J7 730 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 NELFAQ9H3P2 528 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 SP140LQ9H930 580 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 ACKR4Q9NPB9 350 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 PNRC2Q9NPJ4 139 aaKnown RBP10.5□□□□□ -0.73
TRIM40-205ENST00000307859 CYSLTR2Q9NS75 346 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 CENPMQ9NSP4 180 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 TBCCD1Q9NVR7 557 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 OR52A1Q9UKL2 312 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 POLR1DQ9Y2S0 133 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 EMC9Q9Y3B6 208 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 FREM1Q5H8C1 2179 aa10.5□□□□□ -0.73
TRIM40-205ENST00000307859 TMEM269A0A1B0GVZ9 245 aa10.49□□□□□ -0.73
TRIM40-205ENST00000307859 AIPO00170 330 aa10.49□□□□□ -0.73
TRIM40-205ENST00000307859 PTTG1O95997 202 aa10.49□□□□□ -0.73
TRIM40-205ENST00000307859 PAHP00439 452 aa10.49□□□□□ -0.73
TRIM40-205ENST00000307859 EIF4EP06730 217 aaKnown RBP10.49□□□□□ -0.73
TRIM40-205ENST00000307859 IL7P13232 177 aa10.49□□□□□ -0.73
TRIM40-205ENST00000307859 ADRA2CP18825 462 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms