RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CKLFQ9UBR5 152 aa13.55□□□□□ -0.24
CSDC2-201ENST00000306149 CA14Q9ULX7 337 aa13.55□□□□□ -0.24
CSDC2-201ENST00000306149 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF28P17035 718 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 DNASE1L1P49184 302 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 FBXW4P57775 412 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 GLT8D1Q68CQ7 371 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 EIF4E3Q8N5X7 224 aaKnown RBP13.54□□□□□ -0.24
CSDC2-201ENST00000306149 BVESQ8NE79 360 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 OR4S1Q8NGB4 309 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 OR5M9Q8NGP3 310 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 OR6K3Q8NGY3 331 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 OR52N5Q8NH56 324 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 EMC6Q9BV81 110 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 GLS2Q9UI32 602 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
CSDC2-201ENST00000306149 FBXO4Q9UKT5 387 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 LOC107986453A0A1B0GWG9 222 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 A0A1W2PQD3 144 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 TMEM235A6NFC5 223 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 MS4A18H0YCH9 400 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 H3BUI4 141 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 SULT1C2O00338 296 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 RAB3DO95716 219 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 CTRB1P17538 263 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ATF4P18848 351 aaPredicted RBP13.54□□□□□ -0.24
CSDC2-201ENST00000306149 PNLIPRP2P54317 469 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 MS4A18Q3C1V0 323 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF660Q6AZW8 331 aaPredicted RBP13.54□□□□□ -0.24
CSDC2-201ENST00000306149 CTRB2Q6GPI1 263 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ACBD4Q8NC06 268 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 CCDC107Q8WV48 283 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 DMRTA2Q96SC8 542 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 P2RY10O00398 339 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 AMY2AP04746 511 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 NAGAP17050 411 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 MPGP29372 298 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 SCGB2B2Q4G0G5 96 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 ST8SIA4Q92187 359 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 CMBLQ96DG6 245 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 UPB1Q9UBR1 384 aa13.54□□□□□ -0.24
CSDC2-201ENST00000306149 TMEM269A0A1B0GVZ9 245 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 RFPL4AA6NLU0 287 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 RFPL4AL1F8VTS6 287 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 H3BML4 177 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 TSPAN4O14817 238 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 TO15178 435 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 PMS2P2O95744 297 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF823P16415 610 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 SLC26A5P58743 744 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 TAS2R19P59542 299 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 HNRNPKP61978 463 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSDC2-201ENST00000306149 NR0B2Q15466 257 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 ARSKQ6UWY0 536 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 OR4D6Q8NGJ1 314 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 EDAQ92838 391 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 FAM46BQ96A09 425 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 NUDT22Q9BRQ3 303 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 POTEKPQ9BYX7 375 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 SUSD2Q9UGT4 822 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 FBXL2Q9UKC9 423 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
CSDC2-201ENST00000306149 LGALS8O00214 317 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 POU3F1Q03052 451 aaPredicted RBP13.53□□□□□ -0.24
CSDC2-201ENST00000306149 BTN1A1Q13410 526 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 TFAP2EQ6VUC0 442 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 CD163Q86VB7 1156 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 TMEM229BQ8NBD8 167 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF248Q8NDW4 579 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 MFFQ9GZY8 342 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 MYOZ1Q9NP98 299 aaPredicted RBP13.53□□□□□ -0.24
CSDC2-201ENST00000306149 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 OR52A1Q9UKL2 312 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 HHLA2Q9UM44 414 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 HRH3Q9Y5N1 445 aa13.53□□□□□ -0.24
CSDC2-201ENST00000306149 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 ADAM10O14672 748 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF217O75362 1048 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 SPDEFO95238 335 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 OR4E1P0C645 316 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.24
CSDC2-201ENST00000306149 SLC26A10Q8NG04 563 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 MVB12AQ96EY5 273 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 SCPEP1Q9HB40 452 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 FGF21Q9NSA1 209 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 R4GMQ9 66 aa13.52□□□□□ -0.24
CSDC2-201ENST00000306149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.52□□□□□ -0.25
CSDC2-201ENST00000306149 TMEM82A0PJX8 343 aa13.52□□□□□ -0.25
CSDC2-201ENST00000306149 FSTP19883 344 aa13.52□□□□□ -0.25
CSDC2-201ENST00000306149 CRABP1P29762 137 aa13.52□□□□□ -0.25
CSDC2-201ENST00000306149 RNF4P78317 190 aa13.52□□□□□ -0.25
CSDC2-201ENST00000306149 PMPCAQ10713 525 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms