RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CENPOQ9BU64 300 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 BARHL1Q9BZE3 327 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF385DQ9H6B1 395 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 UBTD1Q9HAC8 227 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 GPR173Q9NS66 373 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 TMEM100Q9NV29 134 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SIP14410 1827 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ZC3H12DA2A288 527 aaKnown RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ACHEP22303 614 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 HEPHL1Q6MZM0 1159 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 KCTD9Q7L273 389 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SLC38A9Q8NBW4 561 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 NOX4Q9NPH5 578 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 TAS2R8Q9NYW2 309 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 CKAP5Q14008 2032 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 LIPT2A6NK58 231 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 PLPP3O14495 311 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 DNPH1O43598 174 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 CRHBPP24387 322 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 IL3RAP26951 378 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ERVK-16P61578 105 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 RAB12Q6IQ22 244 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 FAM26EQ8N5C1 309 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 OR52I1Q8NGK6 324 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 HAS2Q92819 552 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 MUL1Q969V5 352 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 FCRL1Q96LA6 429 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 C13orf42A0A1B0GVH6 325 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 LOC107986453A0A1B0GWG9 222 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ABCD4O14678 606 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 GLRA1P23415 457 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 YIF1BQ5BJH7 314 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 OTPQ5XKR4 325 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 TIPARPQ7Z3E1 657 aaKnown RBP8.29□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF573Q86YE8 665 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 OR56B1Q8NGI3 324 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SELENOIQ9C0D9 397 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SLC25A19Q9HC21 320 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 PSORS1C1Q9UIG5 152 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 SIGLEC7Q9Y286 467 aa8.29□□□□□ -1.08
PTPRE-202ENST00000306042 CUL9Q8IWT3 2517 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 A6NIN4 97 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PMS2P2O95744 297 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 RAB2AP61019 212 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NCS1P62166 190 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 FMODQ06828 376 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ADGRG3Q86Y34 549 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 CMTM4Q8IZR5 234 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SPARTQ8N0X7 666 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 OR4K15Q8NH41 348 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 OR52N1Q8NH53 320 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SYNPRQ8TBG9 265 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 MCHR2Q969V1 340 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 TMIGD2Q96BF3 282 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 GPR84Q9NQS5 396 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 C20orf141Q9NUB4 165 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SLCO1C1Q9NYB5 712 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF69Q9UC07 566 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PRDM4Q9UKN5 801 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 TCRBV5S2A0A599 114 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 TO15178 435 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SMAD9O15198 467 aaKnown RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NGFRP08138 427 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 HTR2CP28335 458 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PAN3Q58A45 887 aaKnown RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 LSRQ86X29 649 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SPERTQ8NA61 448 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 B3GNT2Q9NY97 397 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 RABL2AQ9UBK7 228 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 RABL2BQ9UNT1 228 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 A0A1W2PQL4 384 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 GABRPO00591 440 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NME2P1O60361 137 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NRASP01111 189 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NME2P22392 152 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 STOMP27105 288 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 HCCSP53701 268 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 GNB2P62879 340 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 EMX1Q04741 257 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PABPC1L2AQ5JQF8 200 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 WDR88Q6ZMY6 472 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 DCDC5Q6ZRR9 648 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ATG4DQ86TL0 474 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 EGFL6Q8IUX8 553 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ACOXLQ9NUZ1 547 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 NTMQ9P121 344 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ING1Q9UK53 422 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 C7orf72A4D263 438 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ZAR1LA6NP61 321 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 C4orf51C9J302 202 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ZNF32P17041 273 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 PCBP3P57721 371 aaKnown RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 S100A10P60903 97 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 Q8N402 240 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms