RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SLC35E1Q96K37 410 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CABLES2Q9BTV7 478 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 BCO1Q9HAY6 547 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 C19orf53Q9UNZ5 99 aaPredicted RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF236Q9UL36 1845 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 BCL6P41182 706 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ELAVL1Q15717 326 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 OR4F5Q8NH21 305 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 WDFY2Q96P53 400 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 OR4F4Q96R69 305 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ULBP3Q9BZM4 244 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 MTCH1Q9NZJ7 389 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PLXNA1Q9UIW2 1896 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF724A8MTY0 619 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 GABRA2P47869 451 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 FOXB2Q5VYV0 432 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 LYSMD4Q5XG99 296 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF626Q68DY1 528 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DOK4Q8TEW6 326 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 RASD2Q96D21 266 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TOE1Q96GM8 510 aaKnown RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 INSM2Q96T92 566 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 PRAMEF25A6NGN4 478 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 G3V3Q6 166 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CTRB1P17538 263 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CARD18P57730 90 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CTBSQ01459 385 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CTRB2Q6GPI1 263 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF761Q86XN6 746 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ANKLE1Q8NAG6 615 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 S1PR5Q9H228 398 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 BCL2L10Q9HD36 194 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ACOXLQ9NUZ1 547 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 POLDIP2Q9Y2S7 368 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 PARP14Q460N5 1801 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TARM1B6A8C7 271 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 OR10J4P0C629 311 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 RPL12P30050 165 aaKnown RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ARR3P36575 388 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 RPL34P49207 117 aaKnown RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DGCR2P98153 550 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DPTQ07507 201 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 GDPD3Q7L5L3 318 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 H3BQ06 376 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 H7C1C5 153 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 KCNJ3P48549 501 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 PHLDA2Q53GA4 152 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 NLGN4XQ8N0W4 816 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TEAD3Q99594 435 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ELF4Q99607 663 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ATF6BQ99941 703 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 IFT22Q9H7X7 185 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 HEYLQ9NQ87 328 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CD207Q9UJ71 328 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 USP22Q9UPT9 525 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 FOXJ3Q9UPW0 622 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 HS3ST3A1Q9Y663 406 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DVL1O14640 695 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CHEK1O14757 476 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 B3GALNT1O75752 331 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DVL1P1P54792 670 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 SHHQ15465 462 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DCAF12Q5T6F0 453 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TRNP1Q6NT89 227 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ANGPTL5Q86XS5 388 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 GALNT16Q8N428 558 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 SPICQ8N5J4 248 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 OR8U1Q8NH10 309 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 LIPHQ8WWY8 451 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 PINX1Q96BK5 328 aaKnown RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DECR2Q9NUI1 292 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 MED9Q9NWA0 146 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TAS2R4Q9NYW5 299 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 SERPINE3A8MV23 424 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 GPX5O75715 221 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 COX5AP20674 150 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 DIO1P49895 249 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM182Q6ZP80 229 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 RNF175Q8N4F7 328 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 SLCO4A1Q96BD0 722 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 WWTR1Q9GZV5 400 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 LAT2Q9GZY6 243 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 FLVCR1Q9Y5Y0 555 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 R4GMQ9 66 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 WNK3Q9BYP7 1800 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 CDK5Q00535 292 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 LBHQ53QV2 105 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM229BQ8NBD8 167 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 C2orf50Q96LR7 162 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 A0A1B0GX78 115 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 TNFRSF10CO14798 259 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ARSAP15289 507 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 RBP2P50120 134 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF90Q03938 601 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF542PQ5EBM4 170 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 USP51Q70EK9 711 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 ABI3BPQ7Z7G0 1075 aa6.99□□□□□ -1.29
SF3B3-201ENST00000302516 MAP6Q96JE9 813 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms