RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 LINC00303Q3SY05 128 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 ZMAT1Q5H9K5 638 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 FAM27D1Q5T7N8 215 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF813Q6ZN06 617 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 FGD2Q7Z6J4 655 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 CATSPERDQ86XM0 798 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 GCNT2Q8N0V5 402 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 Q8NA96 180 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 TBC1D15Q8TC07 691 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 RGP1Q92546 391 aaPredicted RBP11.42□□□□□ -0.58
CCDC7-202ENST00000302316 OR14A2Q96R54 314 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 TPK1Q9H3S4 243 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 PNRC2Q9NPJ4 139 aaKnown RBP11.42□□□□□ -0.58
CCDC7-202ENST00000302316 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 TMEM269A0A1B0GVZ9 245 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SRSF10O75494 262 aaKnown RBP11.42□□□□□ -0.58
CCDC7-202ENST00000302316 CST2P09228 141 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 CLEC2LP0C7M8 214 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 MYL9P24844 172 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF404Q494X3 552 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 KRTCAP3Q53RY4 240 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 C9orf135Q5VTT2 229 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 PAMR1Q6UXH9 720 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 RHOUQ7L0Q8 258 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SLC22A24Q8N4F4 322 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 MCFD2Q8NI22 146 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 FBXO17Q96EF6 278 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 MED18Q9BUE0 208 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SLC22A13Q9Y226 551 aa11.42□□□□□ -0.58
CCDC7-202ENST00000302316 SHISA3A0PJX4 238 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 GATBO75879 557 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 FARS2O95363 451 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 DCTDP32321 178 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 RORCP51449 518 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 FAPQ12884 760 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 HNRNPA0Q13151 305 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 STK11Q15831 433 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 IL17RDQ8NFM7 739 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 WNT2BQ93097 391 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 SLC25A46Q96AG3 418 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 PPIL3Q9H2H8 161 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 NIPAL2Q9H841 368 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 BRD7Q9NPI1 651 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 PRSS50Q9UI38 385 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 TUBD1Q9UJT1 453 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 OR52A1Q9UKL2 312 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 SLC5A6Q9Y289 635 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 A0A1W2PPK0 400 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 H3BSH0 61 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 ARL6IP5O75915 188 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 TPOP07202 933 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 OCM2P0CE71 109 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 MTNR1BP49286 362 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 PSMA6P60900 246 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 GRB2P62993 217 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 HIST1H3AP68431 136 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 Q499Y3 187 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 BCL2L15Q5TBC7 163 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 HIST2H3PS2Q5TEC6 136 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 HIST2H3AQ71DI3 136 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 FAM214BQ7L5A3 538 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 SLC16A14Q7RTX9 510 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 CISD2Q8N5K1 135 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 C9orf106Q8NAJ2 232 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 ATF6BQ99941 703 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 BARHL1Q9BZE3 327 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 C6orf62Q9GZU0 229 aaPredicted RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
CCDC7-202ENST00000302316 FAM206AQ9NX38 181 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 PLEK2Q9NYT0 353 aa11.41□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF879B4DU55 563 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 UCHL1P09936 223 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 OR3A2P47893 321 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 MMP16P51512 607 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 PRKXP51817 358 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 FOXG1P55316 489 aaPredicted RBP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 SCRN3Q0VDG4 424 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 SF3B4Q15427 424 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 NRN1LQ496H8 165 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 CCDC92Q53HC0 331 aaPredicted RBP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 ELFN2Q5R3F8 820 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 NSUN5P2Q63ZY6 315 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 ZNF324BQ6AW86 544 aaPredicted RBP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 OR2A2Q6IF42 318 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 CD163Q86VB7 1156 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 OR10AC1Q8NH08 325 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 GPR148Q8TDV2 347 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 TSEN15Q8WW01 171 aaKnown RBP11.4□□□□□ -0.58
CCDC7-202ENST00000302316 DACH2Q96NX9 599 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 NOX4Q9NPH5 578 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 G6PC2Q9NQR9 355 aa11.4□□□□□ -0.58
CCDC7-202ENST00000302316 MALT1Q9UDY8 824 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms