RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ZFP62Q8NB50 900 aaPredicted RBP10.63□□□□□ -0.71
TPM3-202ENST00000302206 TMEM178AQ8NBL3 297 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 OR6N1Q8NGY5 312 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 OR2AJ1Q8NGZ0 328 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 OR10D3Q8NH80 312 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 TMEM45BQ96B21 275 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 SLAMF6Q96DU3 332 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 ZNF385AQ96PM9 386 aaKnown RBP10.63□□□□□ -0.71
TPM3-202ENST00000302206 PPP1R3EQ9H7J1 279 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 ACKR4Q9NPB9 350 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 CYSLTR2Q9NS75 346 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 FAIMQ9NVQ4 179 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
TPM3-202ENST00000302206 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 FLVCR1Q9Y5Y0 555 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 SPTA1P02549 2419 aa10.63□□□□□ -0.71
TPM3-202ENST00000302206 NCKAP5O14513 1909 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 COL6A6A6NMZ7 2263 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 IGKV3D-15A0A087WSY6 115 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 IGHV3-15A0A0B4J1V0 119 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ACOD1A6NK06 481 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ZNF891A8MT65 544 aaPredicted RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 ZNF878C9JN71 531 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 DHHO43323 396 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 SLC43A1O75387 559 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 WNT11O96014 354 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ACTL6AO96019 429 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 PNPP00491 289 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 APOA1P02647 267 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 UBCP0CG48 685 aaKnown RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 ZNF708P17019 499 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 NPR2P20594 1047 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 MSR1P21757 451 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 EIF2S3P41091 472 aaKnown RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 EIF1AXP47813 144 aaKnown RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 LHX2P50458 406 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ZNF84P51523 738 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 CLDN15P56746 228 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 SCAND1P57086 179 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 HIST1H3AP68431 136 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 STK11Q15831 433 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 SLC25A35Q3KQZ1 300 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ATP1A1-AS1Q5TC04 95 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 HIST2H3PS2Q5TEC6 136 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 OTPQ5XKR4 325 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 OR7E24Q6IFN5 339 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 CNIH2Q6PI25 160 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 KLHL24Q6TFL4 600 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 HIST2H3AQ71DI3 136 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 VASH2Q86V25 355 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 SLC22A16Q86VW1 577 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 LURAP1LQ8IV03 231 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 MEIOBQ8N635 442 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 HES7Q9BYE0 225 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 NELFAQ9H3P2 528 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ZNF552Q9H707 407 aaPredicted RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 SEC61A2Q9H9S3 476 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 RNF122Q9H9V4 155 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 TCF7L1Q9HCS4 588 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 B3GAT2Q9NPZ5 323 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
TPM3-202ENST00000302206 OR52A1Q9UKL2 312 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 KNTC1P50748 2209 aa10.62□□□□□ -0.71
TPM3-202ENST00000302206 ATMQ13315 3056 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 A0A1B0GTH9 108 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 A0A1W2PPK0 400 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 H0YC42 278 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 AIPO00170 330 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 NKX2-8O15522 239 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 ELK1P19419 428 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 FSTP19883 344 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 CTSSP25774 331 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 TALDO1P37837 337 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 STARP49675 285 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 CLDN18P56856 261 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 ARG2P78540 354 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 MRPS34P82930 218 aaKnown RBP10.61□□□□□ -0.71
TPM3-202ENST00000302206 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
TPM3-202ENST00000302206 ZNF766Q5HY98 468 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 RIPPLY2Q5TAB7 128 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 BAIAP2L2Q6UXY1 529 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 STAC2Q6ZMT1 411 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 FCRLAQ7L513 359 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 LRRTM1Q86UE6 522 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 SNX29P2Q8IUI4 249 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 OR8H2Q8N162 312 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 FAM109AQ8N4B1 249 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 OR10S1Q8NGN2 331 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 TRMT10AQ8TBZ6 339 aaKnown RBP10.61□□□□□ -0.71
TPM3-202ENST00000302206 ULBP2Q9BZM5 246 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 EMC7Q9NPA0 242 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 CENPMQ9NSP4 180 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 FAM206AQ9NX38 181 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
TPM3-202ENST00000302206 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms