RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 HOXC11O43248 304 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 PIAS2O75928 621 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 P04436 131 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 PAFAH1B3Q15102 231 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 LBX2Q6XYB7 198 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 C1QTNF2Q9BXJ5 285 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 LPAR5Q9H1C0 372 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 PLEKHA2Q9HB19 425 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 B3GAT1Q9P2W7 334 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 ZNF354AO60765 605 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 NDUFB2O95178 105 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 HEXAP06865 529 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 KCNJ3P48549 501 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 BCL2L2Q92843 193 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 CDKN2DP55273 166 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 ZNF765Q7L2R6 523 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 SRPK3Q9UPE1 567 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 ARAP2Q8WZ64 1704 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 NKX2-1P43699 371 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 ZFPM2Q8WW38 1151 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 ADAT3Q96EY9 351 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 NKX2-4Q9H2Z4 354 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 DMRT3Q9NQL9 472 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 HELZP42694 1942 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 COX5AP20674 150 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 PIP5KL1Q5T9C9 394 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 LETMD1Q6P1Q0 360 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 SFXN4Q6P4A7 337 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 Q6ZVU0 165 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 RNF175Q8N4F7 328 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 C2orf15Q8WU43 125 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 WFIKKN1Q96NZ8 548 aa10.31□□□□□ -0.76
HDGFL3-201ENST00000299633 A0A1W2PN81 502 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 AQP8O94778 261 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CHRNA7P36544 502 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 COL9A2Q14055 689 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 OR1C1Q15619 314 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 YRDCQ86U90 279 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CSNK1A1LQ8N752 337 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 LHX3Q9UBR4 397 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CAMK2AQ9UQM7 478 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 HRH2P25021 359 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 NOVA1P51513 510 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ADGRE4PQ86SQ3 457 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 RHOXF1Q8NHV9 184 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 NETO1Q8TDF5 533 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 PSMB6P28072 239 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GNG4P50150 75 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 MS4A13Q5J8X5 152 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 PACRGQ96M98 296 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 SLC30A3Q99726 388 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 LOC107984156A0A0G2JMH3 177 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 NEURL1O76050 574 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ARL17AQ8IVW1 177 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 OR52A4PA6NMU1 304 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ZNF716A6NP11 495 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GLCEO94923 617 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 TGFBR3Q03167 851 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 VRK2Q86Y07 508 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 UFC1Q9Y3C8 167 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 C7orf72A4D263 438 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 PRAMEF4O60810 478 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GPR37L1O60883 481 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 TFAP2AP05549 437 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CYB561A3Q8NBI2 242 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ISG20Q96AZ6 181 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GYPAP02724 150 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CPOXP36551 454 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 MEF2AQ02078 507 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 TMEM184AQ6ZMB5 413 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 SLC7A6Q92536 515 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 OR52A1Q9UKL2 312 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CA2P00918 260 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ADAMTS18Q8TE60 1221 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GPR87Q9BY21 358 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CRYBG1Q9Y4K1 1723 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 TMEM131Q92545 1883 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 A0A1W2PRU2 124 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 SLC16A5O15375 505 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 SPINT2O43291 252 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 ZNF30P17039 623 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 WDR5P61964 334 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 POLDIP2Q9Y2S7 368 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 PLRG1O43660 514 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 GLRA1P23415 457 aa10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 DCAF13Q9NV06 445 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-201ENST00000299633 H7C2G1 150 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 OR1D4P47884 311 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 DECR2Q9NUI1 292 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 ASIC5Q9NY37 505 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 WNT7BP56706 349 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 MANEALQ5VSG8 457 aa10.29□□□□□ -0.76
HDGFL3-201ENST00000299633 OR4C11Q6IEV9 310 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms