RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ACTBP60709 375 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 ACTG1P63261 375 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 TAGLNQ01995 201 aaKnown RBP21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 CDNFQ49AH0 187 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 COL13A1Q5TAT6 717 aaPredicted RBP21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 FDX2Q6P4F2 183 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 OR13C8Q8NGS7 320 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 FGGYQ96C11 551 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 DPYSL5Q9BPU6 564 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 PTGES2Q9H7Z7 377 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 OR52A1Q9UKL2 312 aa21.83■■□□□ 1.08
SPTSSA-201ENST00000298130 RHPN2P1A8MT19 583 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 A8MVM7 634 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 DXOO77932 396 aaKnown RBP21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 HLA-AP01891 365 aaKnown RBP21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ZNF823P16415 610 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 CDH26Q8IXH8 852 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 POTEKPQ9BYX7 375 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 SESN1Q9Y6P5 492 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 NPIPB7O75200 414 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ZNF735P0CB33 412 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 POU3F1Q03052 451 aaPredicted RBP21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ROM1Q03395 351 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 CFAP77Q6ZQR2 320 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 PDZD9Q8IXQ8 264 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 CASTOR1Q8WTX7 329 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 VN1R1Q9GZP7 353 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 C8orf33Q9H7E9 229 aaPredicted RBP21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 G6PC2Q9NQR9 355 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 VSX1Q9NZR4 365 aaPredicted RBP21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 HHLA2Q9UM44 414 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 VSIG4Q9Y279 399 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 C10orf142B7Z368 130 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 APOC3P02656 99 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 MPGP29372 298 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 FBXW4P57775 412 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 CFHR1Q03591 330 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ELP2Q6IA86 826 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ARSKQ6UWY0 536 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 ADGRE4PQ86SQ3 457 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 CNTD2Q9H8S5 307 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 C12orf4Q9NQ89 552 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 COPS7AQ9UBW8 275 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 PRELID1Q9Y255 219 aa21.82■■□□□ 1.08
SPTSSA-201ENST00000298130 IGFBP3P17936 291 aaPredicted RBP21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 AVPR2P30518 371 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 SCAND1P57086 179 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC29A4Q7RTT9 530 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 GKN2Q86XP6 184 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 HRH3Q9Y5N1 445 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 OR5H14A6NHG9 310 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 GALNSP34059 522 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 CXADRP78310 365 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 FAM219AQ8IW50 185 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 BVESQ8NE79 360 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 OR52N4Q8NGI2 321 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 R4GMQ9 66 aa21.81■■□□□ 1.08
SPTSSA-201ENST00000298130 RFPL4AA6NLU0 287 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 RFPL4AL1F8VTS6 287 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 MS4A18H0YCH9 400 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 NME1P15531 152 aaKnown RBP21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 FBLP22087 321 aaKnown RBP21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 CD38P28907 300 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 LUMP51884 338 aaPredicted RBP21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 MS4A18Q3C1V0 323 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 HDDC2Q7Z4H3 204 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 FJX1Q86VR8 437 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 OR5M9Q8NGP3 310 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 SOX7Q9BT81 388 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 ZNF304Q9HCX3 659 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 H3BMH7 237 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 TRIM77I1YAP6 450 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 PMS2P2O95744 297 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 MT-ATP6P00846 226 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 CD34P28906 385 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC26A5P58743 744 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 SHARPINQ9H0F6 387 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 MMACHCQ9Y4U1 282 aa21.8■■□□□ 1.08
SPTSSA-201ENST00000298130 FER1L5A0AVI2 2057 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 TUBAL3A6NHL2 446 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 A8MXK9 166 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC2A1P11166 492 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 PAPD4Q6PIY7 484 aaKnown RBP21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 GRINAQ7Z429 371 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 TMEM229BQ8NBD8 167 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 SLC26A10Q8NG04 563 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 DAZLQ92904 295 aaKnown RBP21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 C12orf10Q9HB07 376 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 H3BUI4 141 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 EIF4E2O60573 245 aaKnown RBP21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 GNB3P16520 340 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 ANOS1P23352 680 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 CAPZA1P52907 286 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 ATP1B3P54709 279 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 UBXN2BQ14CS0 331 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 KCTD9Q7L273 389 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 ZNF584Q8IVC4 421 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 TSTD1Q8NFU3 115 aa21.79■■□□□ 1.08
SPTSSA-201ENST00000298130 OR1N1Q8NGS0 311 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms