RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SPEM2Q0P670 501 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 SNTB1Q13884 538 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 LRFN4Q6PJG9 635 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 C17orf82Q86X59 251 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 SVBPQ8N300 66 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 ADPRHL1Q8NDY3 354 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 STEAP2Q8NFT2 490 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR4D10Q8NGI6 311 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR9A4Q8NGU2 314 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR10K1Q8NGX5 313 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR52N5Q8NH56 324 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 RNF138Q8WVD3 245 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 GCDHQ92947 438 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 TAAR8Q969N4 342 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 NUDT9Q9BW91 350 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 FXYD6Q9H0Q3 95 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 ELOVL3Q9HB03 270 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 COMMD9Q9P000 198 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 DNAJB11Q9UBS4 358 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PTPRZ1P23471 2315 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 TMEM8BA6NDV4 472 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 SULT2B1O00204 365 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 XKRYO14609 159 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 UTS2O95399 124 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 CHRM2P08172 466 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 FOLR2P14207 255 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PGCP20142 388 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 CD34P28906 385 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 POLR2HP52434 150 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 SORDQ00796 357 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PMPCAQ10713 525 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 INPP5JQ15735 1006 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 ARHGAP40Q5TG30 622 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 MTFR2Q6P444 385 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 SKA3Q8IX90 412 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 GALNT16Q8N428 558 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 ARRDC1Q8N5I2 433 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 ZNF441Q8N8Z8 693 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR6N2Q8NGY6 317 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 RHBDD1Q8TEB9 315 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PIGKQ92643 395 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 WDR89Q96FK6 387 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 PHB2Q99623 299 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 NPAS1Q99742 590 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 NKX6-2Q9C056 277 aaPredicted RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 TMEM185BQ9H7F4 350 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 TMEM138Q9NPI0 162 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 G6PC2Q9NQR9 355 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 RYDENQ9NUL5 291 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 MRPL22Q9NWU5 206 aaKnown RBP5.53□□□□□ -1.52
VCAM1-201ENST00000294728 OR10H1Q9Y4A9 318 aa5.53□□□□□ -1.52
VCAM1-201ENST00000294728 MPDZO75970 2070 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 C9orf170A2RU37 121 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 A8MVM7 634 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 TSPAN4O14817 238 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 MAS1P04201 325 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 RLN1P04808 185 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ERCC1P07992 297 aaPredicted RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 HOXB2P14652 356 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 PTNP21246 168 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ALDH3B1P43353 468 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 CBX5P45973 191 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 BLKP51451 505 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 GLO1Q04760 184 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 PLA2G7Q13093 441 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 PPA1Q15181 289 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 SURF2Q15527 256 aaPredicted RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 CD226Q15762 336 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ZNF239Q16600 458 aaKnown RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 Q6ZSR3 168 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 PEG10Q86TG7 708 aaKnown RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 CCDC54Q8NEL0 328 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 CCL4L1Q8NHW4 92 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ELP5Q8TE02 316 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 TSEN15Q8WW01 171 aaKnown RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ZBTB8AQ96BR9 441 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 KTI12Q96EK9 354 aaPredicted RBP5.52□□□□□ -1.53
VCAM1-201ENST00000294728 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 SCGB3A2Q96PL1 93 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 ATG5Q9H1Y0 275 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 RAB18Q9NP72 206 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 SEMA5BQ9P283 1151 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 IKZF2Q9UKS7 526 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 CACNA1BQ00975 2339 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 SPTY2D1-AS1A0A0U1RR47 76 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 A0A1B0GVT2 93 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 TMEM218A2RU14 115 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 H3BMH7 237 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 RAB27BO00194 218 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 PLPP3O14495 311 aa5.52□□□□□ -1.53
VCAM1-201ENST00000294728 TAAR5O14804 337 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms