RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 P2RY6Q15077 328 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 CFAP77Q6ZQR2 320 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SLC16A14Q7RTX9 510 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SYT9Q86SS6 491 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF679Q8IYX0 411 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 RNF133Q8WVZ7 376 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 OR8B4Q96RC9 309 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 MROQ9BYG7 248 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SLCO1C1Q9NYB5 712 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 MRM2Q9UI43 246 aaKnown RBP16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 GNG8Q9UK08 70 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 A0A1W2PPW3 197 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 METTL15A6NJ78 407 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 CCL21O00585 134 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 MSTNO14793 375 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SLC22A1O15245 554 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 LRRTM2O43300 516 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 ABHD16AO95870 558 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 KRT8P05787 483 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 TACSTD2P09758 323 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 CELP19835 753 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 CRYBB2P43320 205 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 PCBD1P61457 104 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 VBP1P61758 197 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 NCS1P62166 190 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 HIST1H3AP68431 136 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 TLE1Q04724 770 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 GPR50Q13585 617 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 HIST2H3PS2Q5TEC6 136 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 HIST2H3AQ71DI3 136 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 RHOUQ7L0Q8 258 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF433Q8N7K0 673 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 GALNT11Q8NCW6 608 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 BCL2L2Q92843 193 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 RNF166Q96A37 237 aaPredicted RBP16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SLAMF6Q96DU3 332 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 ACOXLQ9NUZ1 547 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 IKZF2Q9UKS7 526 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 KALRNO60229 2985 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 INTS1Q8N201 2190 aaKnown RBP16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 GPX5O75715 221 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 LYZL6O75951 148 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 PSMA1P25786 263 aaKnown RBP16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 TAS2R43P59537 309 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 TIMM50Q3ZCQ8 353 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 SOWAHCQ53LP3 525 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 DEGS2Q6QHC5 323 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF474Q6S9Z5 364 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 LRRN1Q6UXK5 716 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 SPATC1Q76KD6 591 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 FAM220AQ7Z4H9 259 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 KRT77Q7Z794 578 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 OR10S1Q8NGN2 331 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 BOD1Q96IK1 185 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 CHCHD6Q9BRQ6 235 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF224Q9NZL3 707 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 ST6GALNAC2Q9UJ37 374 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 STUB1Q9UNE7 303 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 TIMM10BQ9Y5J6 103 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 COL6A6A6NMZ7 2263 aa16.55■□□□□ 0.24
PDLIM3-202ENST00000284770 CIB4A0PJX0 185 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 A8MXE2 369 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 B8ZZF3 427 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 DVL2O14641 736 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 WNT11O96014 354 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 GABRA5P31644 462 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 TGFBR1P36897 503 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 OPRL1P41146 370 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 RPS25P62851 125 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 SCRN3Q0VDG4 424 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 SLC36A2Q495M3 483 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 MRGPRGQ86SM5 289 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 YIPF7Q8N8F6 280 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 C1orf162Q8NEQ5 155 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 TRMT61AQ96FX7 289 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 CENPOQ9BU64 300 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 PNRC2Q9NPJ4 139 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 CENPMQ9NSP4 180 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 GRIP1Q9Y3R0 1128 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 LOC100506127A0A0U1RQW1 187 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 PLPP2O43688 288 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF254O75437 659 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 MMP7P09237 267 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 PATE4P0C8F1 98 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF32P17041 273 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 GABRA6Q16445 453 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 HIKESHIQ53FT3 197 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 LIPNQ5VXI9 398 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 DMKNQ6E0U4 476 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 OR7E24Q6IFN5 339 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 CD200R1LQ6Q8B3 271 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 GDPGP1Q6ZNW5 385 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 LUZP2Q86TE4 346 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 CXorf67Q86X51 503 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 LIX1LQ8IVB5 337 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 FGFBP3Q8TAT2 258 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 NDNFQ8TB73 568 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 LRP12Q9Y561 859 aa16.54■□□□□ 0.24
PDLIM3-202ENST00000284770 ZNF878C9JN71 531 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms