RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CMBLQ96DG6 245 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 SAMD8Q96LT4 415 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 COG8Q96MW5 612 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 SYT4Q9H2B2 425 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 ASH2LQ9UBL3 628 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 EGFL7Q9UHF1 273 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 KLHL21Q9UJP4 597 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 PPP1R3CQ9UQK1 317 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 NME4O00746 187 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 SLC22A2O15244 555 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 SLC16A7O60669 478 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 NDUFB2O95178 105 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 FSHBP01225 129 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 COX4I1P13073 169 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 SDHAP31040 664 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 ERFP50548 548 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 SEC61A1P61619 476 aaKnown RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 TMEM155Q4W5P6 130 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 ESCO2Q56NI9 601 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 AWAT1Q58HT5 328 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 Q6ZR03 302 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 FAM122BQ7Z309 247 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 SLC15A3Q8IY34 581 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 ZNF283Q8N7M2 679 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 SIGLECL1Q8N7X8 197 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 FAM156AQ8NDB6 213 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 OR10AD1Q8NGE0 317 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 RP9Q8TA86 221 aaKnown RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 MRI1Q9BV20 369 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 ANKRD19PQ9H560 264 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 NTN4Q9HB63 628 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 PATZ1Q9HBE1 687 aaKnown RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 KRCC1Q9NPI7 259 aaPredicted RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 MMP26Q9NRE1 261 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 PTTG3PQ9NZH4 202 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 OR5V1Q9UGF6 321 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 IL19Q9UHD0 177 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 COA3Q9Y2R0 106 aaPredicted RBP10.76□□□□□ -0.69
CD44-203ENST00000278386 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 AUP1Q9Y679 476 aa10.76□□□□□ -0.69
CD44-203ENST00000278386 PPIAL4EA0A075B759 164 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 PPIAL4DF5H284 164 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 SOCS2O14508 198 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 AHCYL1O43865 530 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 KHDRBS3O75525 346 aaKnown RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 H1F0P07305 194 aaKnown RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 PPIAL4FP0DN26 164 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 NCK1P16333 377 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 ZNF26P17031 533 aaPredicted RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 TUBG1P23258 451 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 CENPAP49450 140 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 GSK3BP49841 420 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 MMP16P51512 607 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 ZNF154Q13106 437 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 ZMYND11Q15326 602 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 TMPRSS11FQ6ZWK6 438 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 GLB1L2Q8IW92 636 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 MUC20Q8N307 709 aaPredicted RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 ATG16L2Q8NAA4 619 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 DEFB108BQ8NET1 73 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 OR1F12Q8NHA8 337 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 SGMS2Q8NHU3 365 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 SLC7A13Q8TCU3 470 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 RSRC1Q96IZ7 334 aaKnown RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 KCTD14Q9BQ13 255 aaPredicted RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 NMNAT1Q9HAN9 279 aaPredicted RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 TUBG2Q9NRH3 451 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 IL20RAQ9UHF4 553 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 NUP50Q9UKX7 468 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 AURKCQ9UQB9 309 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 FAM32AQ9Y421 112 aaKnown RBP10.75□□□□□ -0.69
CD44-203ENST00000278386 ENPP4Q9Y6X5 453 aa10.75□□□□□ -0.69
CD44-203ENST00000278386 OR6C6A6NF89 314 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 A8MXK9 166 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 IMPA2O14732 288 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 RER1O15258 196 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 DBHP09172 617 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 ZNF12P17014 697 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 MDH2P40926 338 aaKnown RBP10.74□□□□□ -0.69
CD44-203ENST00000278386 RGS6P49758 472 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 NUDT2P50583 147 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 LSM6P62312 80 aaKnown RBP10.74□□□□□ -0.69
CD44-203ENST00000278386 CCDC92Q53HC0 331 aaPredicted RBP10.74□□□□□ -0.69
CD44-203ENST00000278386 GPR139Q6DWJ6 353 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 OR2T2Q6IF00 324 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 ADCK1Q86TW2 530 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 OR5L1Q8NGL2 311 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
CD44-203ENST00000278386 PTP4A1Q93096 173 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 HAVCR1Q96D42 359 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 DUX5Q96PT3 197 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 SIGLEC11Q96RL6 698 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 HOPXQ9BPY8 73 aaPredicted RBP10.74□□□□□ -0.69
CD44-203ENST00000278386 RPS6KA6Q9UK32 745 aa10.74□□□□□ -0.69
CD44-203ENST00000278386 SIGLEC7Q9Y286 467 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms