RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PRR32B1ATL7 298 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 DISC1C4P0D8 188 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 SLC17A2O00624 439 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 IL2RAP01589 272 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 PTNP21246 168 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 EIF2S3P41091 472 aaKnown RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 NR0B1P51843 470 aaKnown RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 RUNX2Q13950 521 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 MELKQ14680 651 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 PRICKLE4Q2TBC4 344 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 EMC4Q5J8M3 183 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 LIPNQ5VXI9 398 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 C11orf88Q6PI97 169 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM205Q6UW68 189 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM185AQ8NFB2 350 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 STEAP2Q8NFT2 490 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 OR1J4Q8NGS1 313 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 ZNRF4Q8WWF5 429 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TAAR9Q96RI9 348 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TSNAXQ99598 290 aaKnown RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 C12orf57Q99622 126 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 DDA1Q9BW61 102 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 COMMD4Q9H0A8 199 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 POFUT1Q9H488 388 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 FBXO34Q9NWN3 711 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 SPHK1Q9NYA1 384 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 FRRS1LQ9P0K9 344 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 CTSFQ9UBX1 484 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 B3GALT1Q9Y5Z6 326 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 C2orf74A8MZ97 194 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 NPIPB9F8W1W9 429 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 SLC35G6P0C7Q6 338 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF735P0CB33 412 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TMIGD3P0DMS9 266 aaPredicted RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 MEOX2P50222 304 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 CXADRP78310 365 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 C4orf46Q504U0 113 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 TRMT12Q53H54 448 aaKnown RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 SPAG16Q8N0X2 631 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
UPF3B-201ENST00000276201 LRRC75AQ8NAA5 344 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 FLVCR1-AS1Q8TAF5 88 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 GRHL3Q8TE85 626 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 DUSP19Q8WTR2 217 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 PTX4Q96A99 478 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 COMMD9Q9P000 198 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 MBD2Q9UBB5 411 aa9.28□□□□□ -0.92
UPF3B-201ENST00000276201 CELSR3Q9NYQ7 3312 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 A0A087WV48 116 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 TRBV6-7A0A0A0MS04 114 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SULT2B1O00204 365 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 GPR75O95800 540 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 STATHP02808 62 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 PTHLHP12272 177 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ACHEP22303 614 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ERVK-25P63136 954 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 KCNAB1Q14722 419 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 GRM7Q14831 915 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 RAB11BQ15907 218 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 FCRL6Q6DN72 434 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 HAGHLQ6PII5 290 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 IL34Q6ZMJ4 242 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF440Q8IYI8 595 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 CARFQ8N187 725 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF248Q8NDW4 579 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 OR4D10Q8NGI6 311 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 VRK1Q99986 396 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SEC11CQ9BY50 192 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 TTTY10Q9BZA0 68 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 WDR13Q9H1Z4 485 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 TSPAN10Q9H1Z9 355 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM14AQ9Y6G1 99 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SDK2Q58EX2 2172 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 BLOC1S5-TXNDC5H3BN57 136 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SNAPINO95295 136 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 PVRP15151 417 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 FOLR1P15328 257 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 CAPZA1P52907 286 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 OC90Q02509 493 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 MEF2DQ14814 521 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 MANEAQ5SRI9 462 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 DCAF12Q5T6F0 453 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 DRAM2Q6UX65 266 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 FAM122BQ7Z309 247 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 KMT5CQ86Y97 462 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 D2HGDHQ8N465 521 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 STK35Q8TDR2 534 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SLC22A18Q96BI1 424 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 Q96M85 177 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 NMNAT3Q96T66 252 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 CHST6Q9GZX3 395 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ESRP2Q9H6T0 727 aaKnown RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM185BQ9H7F4 350 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms