RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TNFSF11O14788 317 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 OR10J4P0C629 311 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 TAF9Q16594 264 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 FAM185AQ8N0U4 392 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 NUDCD2Q8WVJ2 157 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CNRIP1Q96F85 164 aaPredicted RBP10.43□□□□□ -0.74
USP53-201ENST00000274030 IL21Q9HBE4 155 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 TOPAZ1Q8N9V7 1692 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 A0A1W2PPC4 97 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 HPNP05981 417 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 OR8U8P0C7N1 319 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 OPALINQ96PE5 141 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ARRDC1-AS1Q9H2J1 176 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 SIAEQ9HAT2 523 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 HBE1P02100 147 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CHRM2P08172 466 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 JUNBP17275 347 aaPredicted RBP10.43□□□□□ -0.74
USP53-201ENST00000274030 AGBL4Q5VU57 503 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 PHYHIPQ92561 330 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ISG20L2Q9H9L3 353 aaKnown RBP10.43□□□□□ -0.74
USP53-201ENST00000274030 ZAR1LA6NP61 321 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 C2CD4DB7Z1M9 353 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ZNF195O14628 629 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 TNFSF15O95150 251 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A6P0DMU7 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A5P0DMU8 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A7P0DMV0 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A8P0DMV1 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A9P0DMV2 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 EMP3P54852 163 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 BAMBIQ13145 260 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ZNF266Q14584 549 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 DEFB109BQ30KR1 87 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A2Q5DJT8 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A1Q5HYN5 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 S100A7AQ86SG5 101 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 SLC51BQ86UW2 128 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CT45A3Q8NHU0 189 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 RTL8AQ9BWD3 113 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 SLC23A1Q9UHI7 598 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 TBX21Q9UL17 535 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 FLVCR2Q9UPI3 526 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 LOXL2Q9Y4K0 774 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 EIF4EP06730 217 aaKnown RBP10.43□□□□□ -0.74
USP53-201ENST00000274030 SBK3P0C264 359 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ZGLP1P0C6A0 271 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 CLDN15P56746 228 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ROBO4Q8WZ75 1007 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 SEH1LQ96EE3 360 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 ATP23Q9Y6H3 246 aa10.43□□□□□ -0.74
USP53-201ENST00000274030 PLRG1O43660 514 aaKnown RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 RGS11O94810 467 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TXNDC12O95881 172 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 ETV6P41212 452 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 DIO1P49895 249 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 FABP5Q01469 135 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 PRAMEF5Q5TYX0 476 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 PRAMEF6Q5VXH4 476 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TMEM200AQ86VY9 491 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 WFDC8Q8IUA0 241 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 B3GALT5Q9Y2C3 310 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TIMM10BQ9Y5J6 103 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 SHISA8B8ZZ34 492 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CLN3Q13286 438 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 PTOV1Q86YD1 416 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CADM3Q8N126 398 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 KCNRGQ8N5I3 272 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 YIPF5Q969M3 257 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CCDC74BQ96LY2 380 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 SLX4Q8IY92 1834 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 MEIKINA0A087WXM9 373 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 HYAL3O43820 417 aaPredicted RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 TGM6O95932 706 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 SRFP11831 508 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TAGLN2P37802 199 aaKnown RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 RAD52P43351 418 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 RPL34P49207 117 aaKnown RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 THBS3P49746 956 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CMTM2Q8TAZ6 248 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 NIPSNAP3BQ9BS92 247 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 LAT2Q9GZY6 243 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TTC3P53804 2025 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 M0R1B8 84 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 B4GALT1P15291 398 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 FABP6P51161 128 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 YBX1P67809 324 aaKnown RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 ALKBH6Q3KRA9 238 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TMEM182Q6ZP80 229 aaPredicted RBP10.42□□□□□ -0.74
USP53-201ENST00000274030 TAF9BQ9HBM6 251 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 KCNE3Q9Y6H6 103 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 TSTD3H0UI37 97 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 PRRG2O14669 202 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 IL2RAP01589 272 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 B4GALNT1Q00973 533 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms