RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
SS18-202ENST00000269138 RAB35Q15286 201 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 MSMPQ1L6U9 139 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
SS18-202ENST00000269138 TEX30Q5JUR7 227 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 ELFN2Q5R3F8 820 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 PAMR1Q6UXH9 720 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 MEPCEQ7L2J0 689 aaKnown RBP11.01□□□□□ -0.65
SS18-202ENST00000269138 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 DCXRQ7Z4W1 244 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 PACRGLQ8N7B6 248 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 NUP37Q8NFH4 326 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 OR8J1Q8NGP2 316 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 OR1J2Q8NGS2 313 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 OR6N2Q8NGY6 317 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 CA10Q9NS85 328 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 IMPAD1Q9NX62 359 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 DNAJC27Q9NZQ0 273 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 PDZD2O15018 2839 aa11□□□□□ -0.65
SS18-202ENST00000269138 ATE1O95260 518 aa11□□□□□ -0.65
SS18-202ENST00000269138 CD8AP01732 235 aa11□□□□□ -0.65
SS18-202ENST00000269138 MRPL3P09001 348 aaKnown RBP11□□□□□ -0.65
SS18-202ENST00000269138 COX5BP10606 129 aa11□□□□□ -0.65
SS18-202ENST00000269138 ERVS71-1P61550 626 aa11□□□□□ -0.65
SS18-202ENST00000269138 GALK2Q01415 458 aa11□□□□□ -0.65
SS18-202ENST00000269138 NXNL2Q5VZ03 156 aa11□□□□□ -0.65
SS18-202ENST00000269138 C20orf204Q6ZNR8 217 aa11□□□□□ -0.65
SS18-202ENST00000269138 SPATC1Q76KD6 591 aa11□□□□□ -0.65
SS18-202ENST00000269138 CDH24Q86UP0 819 aa11□□□□□ -0.65
SS18-202ENST00000269138 ZNF101Q8IZC7 436 aa11□□□□□ -0.65
SS18-202ENST00000269138 ZNF582Q96NG8 517 aaPredicted RBP11□□□□□ -0.65
SS18-202ENST00000269138 AMELYQ99218 206 aa11□□□□□ -0.65
SS18-202ENST00000269138 H2AFY2Q9P0M6 372 aaPredicted RBP11□□□□□ -0.65
SS18-202ENST00000269138 LAMP3Q9UQV4 416 aa11□□□□□ -0.65
SS18-202ENST00000269138 PLCE1Q9P212 2302 aa11□□□□□ -0.65
SS18-202ENST00000269138 RAI1Q7Z5J4 1906 aaPredicted RBP11□□□□□ -0.65
SS18-202ENST00000269138 SLC16A6O15403 523 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 RRP9O43818 475 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 CLIC3O95833 236 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 NGFP01138 241 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 RAF1P04049 648 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 TTKP33981 857 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 UCP2P55851 309 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 KEAP1Q14145 624 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 EIF2B1Q14232 305 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 ADIPOQQ15848 244 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 TMEM171Q8WVE6 324 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 CYGBQ8WWM9 190 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 IGFBPL1Q8WX77 278 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 C4orf45Q96LM5 186 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 RDH12Q96NR8 316 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 COQ7Q99807 217 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 HDHD2Q9H0R4 259 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 C8orf4Q9NR00 106 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 CENPMQ9NSP4 180 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 FZR1Q9UM11 496 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 KLHDC2Q9Y2U9 406 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 RRP15Q9Y3B9 282 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 GRIP1Q9Y3R0 1128 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 SPEF1Q9Y4P9 236 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 SMPD2O60906 423 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 TMCC2O75069 709 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ENTPD6O75354 484 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ATP6V1G2O95670 118 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 OR4A8P0C604 315 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 GABRB1P18505 474 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 PCSK6P29122 969 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 GLRXP35754 106 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 SNRPGP62308 76 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 RIPK1Q13546 671 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 KRTAP27-1Q3LI81 207 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 LCN1P1Q5VSP4 162 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ZNF544Q6NX49 715 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 RFPL4BQ6ZWI9 263 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 NAA40Q86UY6 237 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 LRP11Q86VZ4 500 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 GID4Q8IVV7 300 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ENTHD1Q8IYW4 607 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 FBXL14Q8N1E6 418 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 TRUB1Q8WWH5 349 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 CCL19Q99731 98 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ATF6BQ99941 703 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 ABHD6Q9BV23 337 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 ZNF442Q9H7R0 627 aa10.99□□□□□ -0.65
SS18-202ENST00000269138 EIF3KQ9UBQ5 218 aaKnown RBP10.99□□□□□ -0.65
SS18-202ENST00000269138 TMEM129A0AVI4 362 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 SLC22A31A6NKX4 558 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 F5H5K5 113 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 APOL3O95236 402 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 LCKP06239 509 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 DNASE1P24855 282 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 HTR1FP30939 366 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 SERPINF1P36955 418 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms