RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CCSO14618 274 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ANXA2P07355 339 aaKnown RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RPS4Y1P22090 263 aaKnown RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PSMD4P55036 377 aaKnown RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FOXL2P58012 376 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CFHR1Q03591 330 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FHL1Q13642 323 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 HLA-BQ31612 363 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MMABQ96EY8 250 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C14orf79Q96F83 325 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 STACQ99469 402 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NAA11Q9BSU3 229 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RSRP1Q9BUV0 290 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SLITRK2Q9H156 845 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PLEKHA6Q9Y2H5 1048 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ETV7Q9Y603 341 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RNF222A6NCQ9 220 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NGFRP08138 427 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MAP3K8P41279 467 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DEFA6Q01524 100 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 EXOSC6Q5RKV6 272 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ETV3LQ6ZN32 361 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR4A4PQ8NGN8 299 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZPLD1Q8TCW7 415 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 Q96M85 177 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NMNAT3Q96T66 252 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 KCNK15Q9H427 330 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TAS2R8Q9NYW2 309 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FLRT3Q9NZU0 649 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TRAV18A0A075B6X5 111 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 KCNAB3O43448 404 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FOLR2P14207 255 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DLSTP36957 453 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 AKR1C3P42330 323 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ARHGEF39Q8N4T4 335 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RCBTB1Q8NDN9 531 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GTF3AQ92664 365 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TMEM41AQ96HV5 264 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZC3H10Q96K80 434 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 LMF1Q96S06 567 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MRI1Q9BV20 369 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RNF122Q9H9V4 155 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 UQCC1Q9NVA1 299 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PILRBQ9UKJ0 227 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FAM96BQ9Y3D0 163 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 KNTC1P50748 2209 aa14.36□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CNOT1A5YKK6 2376 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GGT3PA6NGU5 568 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 F5H0A9 414 aaPredicted RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR2F2O95006 317 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NKX2-2O95096 273 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 APEHP13798 732 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NQO2P16083 231 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR2F1Q13607 317 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZNF565Q8N9K5 539 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR51D1Q8NGF3 324 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RNF166Q96A37 237 aaPredicted RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SEC11CQ9BY50 192 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CHRNA9Q9UGM1 479 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZNF346Q9UL40 294 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 HEATR5AQ86XA9 2040 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SPTBN2O15020 2390 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TRAV8-7A0A075B6U6 113 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 A0A1B0GTH9 108 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MCIDASD6RGH6 385 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CD63P08962 238 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SDHAP31040 664 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DIO1P49895 249 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GGTLC2Q14390 218 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C14orf28Q4W4Y0 310 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 KLHL26Q53HC5 615 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 STEAP1BQ6NZ63 245 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 BIVMQ86UB2 503 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GTPBP8Q8N3Z3 284 aaPredicted RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CLCC1Q96S66 551 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ACKR4Q9NPB9 350 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PRTFDC1Q9NRG1 225 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 METTL1Q9UBP6 276 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 STEAP1Q9UHE8 339 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SERTAD3Q9UJW9 196 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 R4GN57 208 aa14.35□□□□□ -0.11
MAP1LC3B-201ENST00000268607 A0A1B0GWA3 101 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GDF9O60383 454 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CTAG2O75638 210 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PMS2P2O95744 297 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CD8AP01732 235 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ITGB2P05107 769 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RNH1P13489 461 aaKnown RBP14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZNF345Q14585 488 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TGIF1Q15583 401 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ODF4Q2M2E3 257 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PRTGQ2VWP7 1150 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 Q499Y3 187 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GXYLT1Q4G148 440 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NPSR1Q6W5P4 371 aa14.34□□□□□ -0.11
MAP1LC3B-201ENST00000268607 NDUFAF7Q7L592 441 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms