RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MEX3DQ86XN8 651 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 LHX4Q969G2 390 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 NEURL3Q96EH8 262 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 PDLIM5Q96HC4 596 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 NQO2P16083 231 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 RAB38P57729 211 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 RPS23P62266 143 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 DOK4Q8TEW6 326 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 JAM3Q9BX67 310 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 LAMB2P55268 1798 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 ARPC3O15145 178 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 FCGR2CP31995 323 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 EXOSC7Q15024 291 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 OXA1LQ15070 435 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 RANBP10Q6VN20 620 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF761Q86XN6 746 aaPredicted RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 OR2A14Q96R47 310 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 DOCK10Q96BY6 2186 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 GNB1P62873 340 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 PMS2P11Q13670 270 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 OR8G1Q15617 311 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 CPEB2Q7Z5Q1 589 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 LINC00597Q9H2U6 94 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 WTIPA6NIX2 430 aaPredicted RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF354AO60765 605 aaPredicted RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 AOAHP28039 575 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 KDM4DQ6B0I6 523 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 MED20Q9H944 212 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 LMAN1LQ9HAT1 526 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
SRRM4-201ENST00000267260 GPM6AP51674 278 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 EDDM3BP56851 147 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 AANATQ16613 207 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF628Q5EBL2 1059 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 Q6ZN92 141 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
SRRM4-201ENST00000267260 AKR1C3P42330 323 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF542PQ5EBM4 170 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 MFSD12Q6NUT3 480 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TMEM178AQ8NBL3 297 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SLC25A6P12236 298 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 GALR1P47211 349 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
SRRM4-201ENST00000267260 OR10P1Q8NGE3 313 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 MENTQ9BUN1 341 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 PMS2P1A4D2B8 440 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SYT5O00445 386 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 DEDDO75618 318 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 FBXW5Q969U6 566 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 RTL8AQ9BWD3 113 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SPNS1Q9H2V7 528 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 M0R1X1 148 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TTRP02766 147 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 CD37P11049 281 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 MAP2K6P52564 334 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 Q3ZCU0 254 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 PRAMEF25A6NGN4 478 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF140P52738 457 aaPredicted RBP11.11□□□□□ -0.63
SRRM4-201ENST00000267260 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 PRAMEF6Q5VXH4 476 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SPTA1P02549 2419 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SNED1Q8TER0 1413 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 H3BVH4 76 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 M0R2Z0 102 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 DHRS7BQ6IAN0 325 aaPredicted RBP11.11□□□□□ -0.63
SRRM4-201ENST00000267260 DOK3Q7L591 496 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF547Q8IVP9 402 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 GPR32P1Q8NGA4 272 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 FBXO27Q8NI29 283 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TMED6Q8WW62 240 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 TXLNGYQ9BZA5 131 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 CACNA1IQ9P0X4 2223 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 H0YIV9 168 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 GATCO43716 136 aaKnown RBP11.11□□□□□ -0.63
SRRM4-201ENST00000267260 EXT1Q16394 746 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 ACKR1Q16570 336 aa11.11□□□□□ -0.63
SRRM4-201ENST00000267260 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms