RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF600Q6ZNG1 722 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 FLVCR1-AS1Q8TAF5 88 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 APOOQ9BUR5 198 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 TINAGQ9UJW2 476 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC22A13Q9Y226 551 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 MRPS23Q9Y3D9 190 aaKnown RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 TRPM6Q9BX84 2022 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 LOC390937A0A1W2PQ73 354 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 H7C1C5 153 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 FBXO24O75426 580 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 ADH6P28332 368 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 LCN6P62502 163 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 LRRC69Q6ZNQ3 347 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 GRASPQ7Z6J2 395 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 CATSPERDQ86XM0 798 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 ZSCAN4Q8NAM6 433 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 MOGAT1Q96PD6 335 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 CGGBP1Q9UFW8 167 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 GDF2Q9UK05 429 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 FAM96BQ9Y3D0 163 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D3DA0A087WVF3 549 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 DCDC2BA2VCK2 349 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 FITM1A5D6W6 292 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 OR2W5A6NFC9 320 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D3LB9A6J9 549 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D3HP0C7X1 549 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 AGAP20933 346 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 PGDP52209 483 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ADPRHP54922 357 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 PRRT3Q5FWE3 981 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ASPHD2Q6ICH7 369 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D3CQ6IPX1 549 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 CORO6Q6QEF8 472 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MAMDC2Q7Z304 686 aaPredicted RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MDGA2Q7Z553 956 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D3Q8IZP1 549 aaPredicted RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 OR5T3Q8NGG3 340 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 OR13C3Q8NGS6 347 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 NECAB3Q96P71 396 aaPredicted RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 PARP11Q9NR21 331 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 LRIT1Q9P2V4 623 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TBC1D29Q9UFV1 150 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MIOXQ9UGB7 285 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MRPS2Q9Y399 296 aaKnown RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 PCDHGA1Q9Y5H4 931 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 HPGDP15428 266 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF14P17017 642 aaPredicted RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 LSSP48449 732 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 F2RL1P55085 397 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ACTBL2Q562R1 376 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 VITQ6UXI7 678 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 PRSS41Q7RTY9 318 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MRPL43Q8N983 215 aaKnown RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ACBD4Q8NC06 268 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 ADAD2Q8NCV1 583 aaKnown RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 OR4C3Q8NH37 302 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC22A8Q8TCC7 542 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 AMELYQ99218 206 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 DHCR7Q9UBM7 475 aaKnown RBP11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 MEMO1Q9Y316 297 aa11.13□□□□□ -0.63
CHMP2B-201ENST00000263780 TICRRQ7Z2Z1 1910 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 OR2T1O43869 369 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 ICOSLGO75144 302 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 MED6O75586 246 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 HTR3BO95264 441 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF44P15621 663 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 HRH1P35367 487 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 RPS27P42677 84 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 SULT1A2P50226 295 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 MOGAT2Q3SYC2 334 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 DGAT2L6Q6ZPD8 337 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 BCORP1Q8N888 145 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 MRGPRFQ96AM1 343 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 S1PR5Q9H228 398 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 B9D1Q9UPM9 204 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 TIMM10BQ9Y5J6 103 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 SNRNP200O75643 2136 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 FCGR3AP08637 254 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 FOSL1P15407 271 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 CPT2P23786 658 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 EIF2S3P41091 472 aaKnown RBP11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 GLP1RP43220 463 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 HAAOP46952 286 aa11.12□□□□□ -0.63
CHMP2B-201ENST00000263780 PPT1P50897 306 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms