RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TMPRSS11AQ6ZMR5 421 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 BEND4Q6ZU67 534 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 VASH1Q7L8A9 365 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF627Q7L945 461 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 KRT77Q7Z794 578 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 OR52N5Q8NH56 324 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 HSD17B8Q92506 261 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 PPP1R14AQ96A00 147 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 PELI1Q96FA3 418 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 CCDC120Q96HB5 630 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 OPALINQ96PE5 141 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 OR8B4Q96RC9 309 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 MGLLQ99685 303 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 C1QTNF6Q9BXI9 259 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 WNT5BQ9H1J7 359 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 C1orf198Q9H425 327 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 RNF121Q9H920 327 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 PNRC2Q9NPJ4 139 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF629Q9UEG4 869 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 LRP12Q9Y561 859 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM14AQ9Y6G1 99 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 DPPA5A6NC42 116 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 DVL2O14641 736 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 MSTNO14793 375 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 AGFG2O95081 481 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 FARS2O95363 451 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 CNOT4O95628 575 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 ABHD16AO95870 558 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 MT-ND5P03915 603 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 DBHP09172 617 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 MMP7P09237 267 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 COX5AP20674 150 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 LIPAP38571 399 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 OPRL1P41146 370 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 HIST1H3AP68431 136 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 STK11Q15831 433 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 TSTQ16762 297 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 RSPO1Q2MKA7 263 aaPredicted RBP8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 PABPC1L2AQ5JQF8 200 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 SFRP5Q5T4F7 317 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 LIPNQ5VXI9 398 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 ALKBH2Q6NS38 261 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 STAC2Q6ZMT1 411 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 HIST2H3AQ71DI3 136 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 NAA40Q86UY6 237 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF679Q8IYX0 411 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 GJC3Q8NFK1 279 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 OR52N1Q8NH53 320 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 RNF133Q8WVZ7 376 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 ASB17Q8WXJ9 295 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 COG8Q96MW5 612 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 MNTQ99583 582 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 OR2H1Q9GZK4 316 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 KCNN2Q9H2S1 579 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 VCX3AQ9NNX9 186 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 BRD7Q9NPI1 651 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 BABAM2Q9NXR7 383 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 N6AMT1Q9Y5N5 214 aa8.5□□□□□ -1.05
SNRNP40-201ENST00000263694 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 FAM90A27PA6NNH2 459 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 H3BSH0 61 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 PHYHO14832 338 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SGCEO43556 437 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SYNGR3O43761 229 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 PNPP00491 289 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 KRT8P05787 483 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 H2BFMP0C1H6 154 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 CCL2P13500 99 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 PRKXP51817 358 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 NANOS3P60323 173 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 RAB1AP62820 205 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 GALK2Q01415 458 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 TGFBR3Q03167 851 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 ROM1Q03395 351 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 EGR3Q06889 387 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 MFGE8Q08431 387 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SSX1Q16384 188 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 ELFN2Q5R3F8 820 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SYT6Q5T7P8 510 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 LIPKQ5VXJ0 399 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 KCTD18Q6PI47 426 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 C22orf34Q6ZV56 151 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 BHLHA15Q7RTS1 189 aaPredicted RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF367Q7RTV3 350 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 MDP1Q86V88 176 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 WDR31Q8NA23 367 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 CPEB3Q8NE35 698 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 MROQ9BYG7 248 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 NAA50Q9GZZ1 169 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 PIGMQ9H3S5 423 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 B3GNT2Q9NY97 397 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 PLEK2Q9NYT0 353 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 TIMM10BQ9Y5J6 103 aa8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 SPTBN1Q01082 2364 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-201ENST00000263694 C5orf63A6NC05 138 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 F5H5K5 113 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 H3BSA7 217 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms