RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 HRASLS5Q96KN8 279 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 C4orf45Q96LM5 186 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 FOXN4Q96NZ1 517 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 TEAD3Q99594 435 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 ZNF184Q99676 751 aaPredicted RBP10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 COQ7Q99807 217 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 ATF6BQ99941 703 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 TMEM204Q9BSN7 226 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 COPS4Q9BT78 406 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 MROQ9BYG7 248 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 RAB1BQ9H0U4 201 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 ZNF442Q9H7R0 627 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 NIPAL2Q9H841 368 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 CYSLTR2Q9NS75 346 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 CA10Q9NS85 328 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 CBLN4Q9NTU7 201 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 LAMP3Q9UQV4 416 aa10.9□□□□□ -0.66
CLNS1A-201ENST00000263309 FBN2P35556 2912 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 IGHV2OR16-5A0A0B4J2B6 119 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 ZNF670-ZNF695F2Z2N8 137 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 ATP6V1G2-DDX39BF2Z307 99 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 TP53P04637 393 aaPredicted RBP10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 GYPBP06028 91 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 LYNP07948 512 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 SELEP16581 610 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 PEX2P28328 305 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 GGT2P36268 569 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 SLC6A9P48067 706 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 EVX1P49640 407 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 KLHL22Q53GT1 634 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 LPCAT4Q643R3 524 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 C12orf73Q69YU5 71 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 ZNF774Q6NX45 483 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 SLC16A9Q7RTY1 509 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 KRT77Q7Z794 578 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 OR1J1Q8NGS3 322 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 SYNPRQ8TBG9 265 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 APOBEC3DQ96AK3 386 aaPredicted RBP10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 CNN2Q99439 309 aaKnown RBP10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 WDR76Q9H967 626 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 DYNLRB1Q9NP97 96 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 TBCCD1Q9NVR7 557 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 CHCHD3Q9NX63 227 aaKnown RBP10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 CYB5R1Q9UHQ9 305 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 DUSP13Q9UII6 198 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 ST6GALNAC2Q9UJ37 374 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 GDF2Q9UK05 429 aaPredicted RBP10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 HCFC1P51610 2035 aa10.89□□□□□ -0.67
CLNS1A-201ENST00000263309 IGKV1D-43A0A0B4J1Z2 117 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 A0A1W2PPW3 197 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 TVP23AA6NH52 213 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 F5H5K5 113 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 H3BSA7 217 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 ATE1O95260 518 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 MPZL1O95297 269 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 MMP7P09237 267 aaPredicted RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 TACSTD2P09758 323 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 OR4A8P0C604 315 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 CFL1P23528 166 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 IL5RAQ01344 420 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 ENDOGQ14249 297 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 UGT2A3Q6UWM9 527 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 PAMR1Q6UXH9 720 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 DCXRQ7Z4W1 244 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 CPEB3Q8NE35 698 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 ABHD4Q8TB40 342 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 NMNAT2Q9BZQ4 307 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 Q9H521 79 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 PLEKHF2Q9H8W4 249 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 NOX3Q9HBY0 568 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 FAM118AQ9NWS6 357 aa10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 CGGBP1Q9UFW8 167 aaPredicted RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 TMEFF2Q9UIK5 374 aaPredicted RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 NOP16Q9Y3C1 178 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 RPL36Q9Y3U8 105 aaKnown RBP10.88□□□□□ -0.67
CLNS1A-201ENST00000263309 SHISA9B4DS77 424 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 H0YAE9 185 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 RER1O15258 196 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 SLC16A6O15403 523 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 ZNF254O75437 659 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 FADS2O95864 444 aaKnown RBP10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 TFP02787 698 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 LCATP04180 440 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 GAAP10253 952 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 ZNF35P13682 527 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 TNFSF4P23510 183 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 KLF3P57682 345 aaPredicted RBP10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 SNRPGP62308 76 aaKnown RBP10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 CSNK2BP67870 215 aa10.87□□□□□ -0.67
CLNS1A-201ENST00000263309 ACTC1P68032 377 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms