RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZP4Q12836 540 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 NR0B2Q15466 257 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM239Q8WW34 195 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 HS6ST2Q96MM7 605 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 IP6K3Q96PC2 410 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 MRI1Q9BV20 369 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 TTTY10Q9BZA0 68 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 A6NIN4 97 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 MLNRO43193 412 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 LRP3O75074 770 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RCBTB2O95199 551 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 COX5AP20674 150 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CTSSP25774 331 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ACY1Q03154 408 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RBM44Q6ZP01 1051 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 LYSMD2Q8IV50 215 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR10G2Q8NGC3 310 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR4M1Q8NGD0 313 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF417Q8TAU3 575 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RBM18Q96H35 190 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 TPD52L3Q96J77 140 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF587Q96SQ5 575 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR2B2Q9GZK3 357 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR8D2Q9GZM6 311 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 MOV10Q9HCE1 1003 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PRSS50Q9UI38 385 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PLPP2O43688 288 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 NME2P1O60361 137 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 HLA-DQA2P01906 255 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CFIP05156 583 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 SBK2P0C263 348 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PIPP12273 146 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ANXA8P13928 327 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CPEP16870 476 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 NME2P22392 152 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF169Q14929 603 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 FAM76BQ5HYJ3 339 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 KCTD8Q6ZWB6 473 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CALHM1Q8IU99 346 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR51A7Q8NH64 312 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PPP1R14BQ96C90 147 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RDH12Q96NR8 316 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 GTPBP2Q9BX10 602 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 POLR2J2Q9GZM3 115 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 POLR2J3Q9H1A7 115 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 NGBQ9NPG2 151 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ING4Q9UNL4 249 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 WDR45Q9Y484 360 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 GMFGO60234 142 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 IFNW1P05000 195 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF35P13682 527 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF823P16415 610 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CXCR4P61073 352 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 IL5RAQ01344 420 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 KCNMB1Q16558 191 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 WIPI1Q5MNZ9 446 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 FDX2Q6P4F2 183 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 LRP11Q86VZ4 500 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 Q8N7P7 452 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM104Q8NE00 496 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 OR14A16Q8NHC5 309 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 GATAD2BQ8WXI9 593 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC35B4Q969S0 331 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC35G5Q96KT7 338 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PARP12Q9H0J9 701 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 SRPK3Q9UPE1 567 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 SPEF1Q9Y4P9 236 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 PCDHGA9Q9Y5G4 932 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 CCDC187A0A096LP49 1063 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 A0A0X1KG70 313 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SCAF4O95104 1147 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 FABP3P05413 133 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 RNH1P13489 461 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 HK1P19367 917 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 CCL1P22362 96 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 FKBP2P26885 142 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 LINC00205P59089 165 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC35F1Q5T1Q4 408 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 CPOQ8IVL8 374 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SDR9C7Q8NEX9 313 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 HAS2Q92819 552 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TMCO6Q96DC7 493 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 HDHD2Q9H0R4 259 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NUFIP1Q9UHK0 495 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ANAPC10Q9UM13 185 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SPATA2Q9UM82 520 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 POLHQ9Y253 713 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 CREBBPQ92793 2442 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 H3BN98 237 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 AIREO43918 545 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 MRPS14O60783 128 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 FARS2O95363 451 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 IGLV1-44P01699 117 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 HRGP04196 525 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ENTPD1P49961 510 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 DLX1P56177 255 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 EFR3AQ14156 821 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms