RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DPYSL5Q9BPU6 564 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 PPA2Q9H2U2 334 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 MYOZ1Q9NP98 299 aaPredicted RBP13.64□□□□□ -0.23
DDX56-201ENST00000258772 PFDN2Q9UHV9 154 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 SESN1Q9Y6P5 492 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ABCA7Q8IZY2 2146 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 TMEM269A0A1B0GVZ9 245 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 A6NIZ1 184 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 ZNF736B4DX44 427 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 LMX1BO60663 402 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 CD74P04233 296 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 HOXD4P09016 255 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 MPGP29372 298 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 RAP1BP61224 184 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 HNRNPKP61978 463 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX56-201ENST00000258772 RAP1AP62834 184 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 ZP4Q12836 540 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 ATPAF1Q5TC12 328 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 PXDC1Q5TGL8 231 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 LINC00346Q8IVM7 164 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 D2HGDHQ8N465 521 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 ASB10Q8WXI3 467 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 TMEM234Q8WY98 164 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 PTX4Q96A99 478 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 DMRTA2Q96SC8 542 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 ZNF107Q9UII5 783 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 TRIOO75962 3097 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 IGHV1OR21-1A0A087WYE8 117 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 A8MXK9 166 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 NUP62P37198 522 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 CLVS2Q5SYC1 327 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 TMEM244Q5VVB8 128 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 SLC51BQ86UW2 128 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 WDFY1Q8IWB7 410 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 BPIFB2Q8N4F0 458 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 OR4D6Q8NGJ1 314 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 OR5M9Q8NGP3 310 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 EDAQ92838 391 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 ARL5BQ96KC2 179 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 FBXO9Q9UK97 447 aaPredicted RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
DDX56-201ENST00000258772 FARSAQ9Y285 508 aaKnown RBP13.63□□□□□ -0.23
DDX56-201ENST00000258772 VCANP13611 3396 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 IGKV1D-43A0A0B4J1Z2 117 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 TMEM235A6NFC5 223 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 NPIPA5E9PKD4 350 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 ZNF28P17035 718 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 DNM1P34Q6PK57 102 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 DEGS2Q6QHC5 323 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 SLC6A7Q99884 636 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 B3GNT4Q9C0J1 378 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 ZNF230Q9UIE0 474 aaPredicted RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 FBXL2Q9UKC9 423 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 LOC101059948A0A1B0GTJ6 334 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 P2RY10O00398 339 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 NUDT21O43809 227 aaKnown RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 RNF4P78317 190 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 DHRS2Q13268 280 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 OR7A5Q15622 319 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 SCGB2B2Q4G0G5 96 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 C16orf47Q6ZP98 133 aaPredicted RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 SHISA6Q6ZSJ9 500 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 PLXDC1Q8IUK5 500 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 MISPQ8IVT2 679 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 PDZD9Q8IXQ8 264 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 CARFQ8N187 725 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 STEAP2Q8NFT2 490 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 OR1J2Q8NGS2 313 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 OR13C8Q8NGS7 320 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 OR6S1Q8NH40 331 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 OR1S1Q8NH92 325 aa13.62□□□□□ -0.23
DDX56-201ENST00000258772 FOXRED1Q96CU9 486 aaPredicted RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 GDF2Q9UK05 429 aaPredicted RBP13.62□□□□□ -0.23
DDX56-201ENST00000258772 IGHV3-20A0A0C4DH32 117 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 A0A1B0GX78 115 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 KRBOX1C9JBD0 128 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 SPDEFO95238 335 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 CD8AP01732 235 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 FGF2P09038 288 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 RAB6AP20340 208 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 PRKACBP22694 351 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 CORO6Q6QEF8 472 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 ZNF546Q86UE3 836 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.61□□□□□ -0.23
DDX56-201ENST00000258772 BEST3Q8N1M1 668 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 PLPP5Q8NEB5 264 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 OR4S1Q8NGB4 309 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 MFSD8Q8NHS3 518 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms