RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SDHDO14521 159 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SCELO95171 688 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CDS2O95674 445 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PET100P0DJ07 73 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SMIM10L1P0DMW3 83 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LIPCP11150 499 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OSMP13725 252 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PGAM2P15259 253 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 NME2P22392 152 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ACVR1BP36896 505 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CAV2P51636 162 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 MFAP4P55083 255 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ZFP36L1Q07352 338 aaKnown RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PPP1R8Q12972 351 aaKnown RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OLIG2Q13516 323 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 NSDHLQ15738 373 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 UNQ5815/PRO19632Q6UWF5 114 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LYPD4Q6UWN0 246 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 H1FNTQ75WM6 255 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM130Q8N3G9 435 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 WDTC1Q8N5D0 677 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 AMER3Q8N944 861 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CADM4Q8NFZ8 388 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OR51G2Q8NGK0 314 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SMIM10Q96HG1 83 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OR7D2Q96RA2 312 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ASCL2Q99929 193 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GTSF1LQ9H1H1 148 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GBA2Q9HCG7 927 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 AMBNQ9NP70 447 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OR5AC2Q9NZP5 309 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LRP2BPQ9P2M1 347 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF391Q9UJN7 358 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 HDGFL3Q9Y3E1 203 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TCRBV7S3A2A0A539 114 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GAGE12BA1L429 117 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TRGC2P03986 189 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 UCP2P55851 309 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PLP1P60201 277 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TLE3Q04726 772 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM115Q12893 351 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 EBPQ15125 230 aaKnown RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CDKN3Q16667 212 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GCSAMLQ5JQS6 135 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM240Q5SV17 173 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 OR2G6Q5TZ20 316 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SYPL2Q5VXT5 272 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 METRNLQ641Q3 311 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 GLT8D1Q68CQ7 371 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 NHLRC1Q6VVB1 395 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ASB10Q8WXI3 467 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 MYEOVQ96EZ4 313 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CDKN2AIPNLQ96HQ2 116 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 COPS8Q99627 209 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ATF6BQ99941 703 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LRFN3Q9BTN0 628 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ABHD14AQ9BUJ0 271 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 WDR18Q9BV38 432 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF471Q9BX82 626 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 WDR13Q9H1Z4 485 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 HHATLQ9HCP6 504 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SLC45A2Q9UMX9 530 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 DUOX1Q9NRD9 1551 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 NKX2-6A6NCS4 301 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF205O95201 554 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SLC35G6P0C7Q6 338 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 IL2RBP14784 551 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 AVPR1AP37288 418 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PDX1P52945 283 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 EFNB1P98172 346 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 DOC2BQ14184 412 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SGCBQ16585 318 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PCK2Q16822 640 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LTC4SQ16873 150 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ELOA3BQ3SY89 546 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ACOT7LQ6ZUV0 252 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM179BQ7Z7N9 219 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LRP11Q86VZ4 500 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 LGI4Q8N135 537 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ELOA3Q8NG57 546 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 UBTD2Q8WUN7 234 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 CFHR4Q92496 578 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM125Q96AQ2 219 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 MOB3AQ96BX8 217 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 C20orf24Q9BUV8 137 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 PLEKHA1Q9HB21 404 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 HEBP1Q9NRV9 189 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-201ENST00000258733 SLC17A4Q9Y2C5 497 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 WDR45Q9Y484 360 aa6.98□□□□□ -1.29
GPNMB-201ENST00000258733 TNRC6CQ9HCJ0 1690 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TCRBV5S4A2TA0A5A2 114 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 GGT3PA6NGU5 568 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 OR5B21A6NL26 309 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RNASET2O00584 256 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 HSD17B6O14756 317 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms