RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TMEM72A0PK05 275 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SMPD2O60906 423 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SORBS2O94875 1100 aaKnown RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 RAB3DO95716 219 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF117Q03924 483 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 MAB21L1Q13394 359 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF620Q6ZNG0 422 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SYT9Q86SS6 491 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ARSGQ96EG1 525 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SCPEP1Q9HB40 452 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 PPP6CO00743 305 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TO15178 435 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CD97P48960 835 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 PGGT1BP53609 377 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SNTB2Q13425 540 aaKnown RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ADPRMQ3LIE5 342 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 LRRC28Q86X40 367 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CMTM3Q96MX0 182 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 NDUFA2O43678 99 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 CNIH1O95406 144 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 WNT1P04628 370 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 TNFRSF1BP20333 461 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 CD34P28906 385 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 Q6ZTK2 550 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 OR5M1Q8NGP8 315 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 OR52N5Q8NH56 324 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 MZB1Q8WU39 189 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF775Q96BV0 537 aaPredicted RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF681Q96N22 645 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 SH2D7A6NKC9 451 aaPredicted RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 K7ESF4 209 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 GREM1O60565 184 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 CCNKO75909 580 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ERGP11308 486 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 RPS18P62269 152 aaKnown RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF91Q05481 1191 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF74Q16587 644 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ST3GAL2Q16842 350 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 OR51L1Q8NGJ5 315 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 NOX4Q9NPH5 578 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 FSCN3Q9NQT6 498 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 PTTG3PQ9NZH4 202 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 KLK4Q9Y5K2 254 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 A0A0A6YYH2 397 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 A6NJ64 397 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 IFNA7P01567 189 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC22A18ASQ8N1D0 253 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 TAAR6Q96RI8 345 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 PILRAQ9UKJ1 303 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 NME2P1O60361 137 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 H2AFB2P0C5Z0 115 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 EDN3P14138 238 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 NME2P22392 152 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF83P51522 516 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 INSM1Q01101 510 aaPredicted RBP12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 LTBQ06643 244 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 PELI1Q96FA3 418 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 LIPGQ9Y5X9 500 aa12.09□□□□□ -0.47
PRPF38A-201ENST00000257181 EFSO43281 561 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 GASTP01350 101 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 FCER2P06734 321 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 CALCBP10092 127 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 CRMP1Q14194 572 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 COX20Q5RI15 118 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF574Q6ZN55 896 aaPredicted RBP12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 TMPRSS7Q7RTY8 843 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 OR51A4Q8NGJ6 313 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 DPF1Q92782 380 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 SGK3Q96BR1 496 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 GSKIPQ9P0R6 139 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 MSRB2Q9Y3D2 182 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 A0A0B4J2E0 115 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 A0A1B0GX12 115 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 FUT4P22083 530 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 PPP5CP53041 499 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 IL1F10Q8WWZ1 152 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC6A15Q9H2J7 730 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 DLL4Q9NR61 685 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 LOC100289279A0A1B0GTE1 492 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 ETHE1O95571 254 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms