RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CD1AP06126 327 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 EIF4EP06730 217 aaKnown RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ZNF708P17019 499 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 MYL9P24844 172 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 RCVRNP35243 200 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 THBS2P35442 1172 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 MAP2K3P46734 347 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ROM1Q03395 351 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 MFGE8Q08431 387 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 TBRG1Q3YBR2 411 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 TEX30Q5JUR7 227 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 METAP1DQ6UB28 335 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SYT9Q86SS6 491 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 FAM109AQ8N4B1 249 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 OR5AK2Q8NH90 309 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ZNF486Q96H40 463 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ST6GAL2Q96JF0 529 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 CENPMQ9NSP4 180 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 DDX28Q9NUL7 540 aaKnown RBP16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ACOD1A6NK06 481 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SLC19A2O60779 497 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 PAHP00439 452 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 HLA-DQB1P01920 261 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 KIR3DL2P43630 455 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 RASGEF1BQ0VAM2 473 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SLC25A35Q3KQZ1 300 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 WDR38Q5JTN6 314 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 PDSS1Q5T2R2 415 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SFXN4Q6P4A7 337 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 IGFL2Q6UWQ7 119 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SAMD12Q8N8I0 201 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 RNF128Q8TEB7 428 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 UBASH3BQ8TF42 649 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SCNM1Q9BWG6 230 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 RNF121Q9H920 327 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 CYB5R1Q9UHQ9 305 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 ADAM30Q9UKF2 790 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 SLC22A13Q9Y226 551 aa16.72■□□□□ 0.27
TRIM47-201ENST00000254816 OR4C45A6NMZ5 311 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 GPRIN2O60269 458 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 RIDAP52758 137 aaKnown RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 SF3B4Q15427 424 aaKnown RBP eCLIP16.71■□□□□ 0.272e-9■■■■■ 35
TRIM47-201ENST00000254816 OR4M1Q8NGD0 313 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 OR10AC1Q8NH08 325 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 ZNF837Q96EG3 531 aaPredicted RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 BEX2Q9BXY8 128 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 LDAHQ9H6V9 325 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 EXO5Q9H790 373 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 NUFIP1Q9UHK0 495 aaKnown RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 POLR1DQ9Y2S0 133 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 N6AMT1Q9Y5N5 214 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 LHFPL6Q9Y693 200 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 URB1O60287 2271 aaKnown RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 A0A0G2JK05 382 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 ACOT7O00154 380 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 DOK2O60496 412 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 CYTIPO60759 359 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 SGCAQ16586 387 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 CFAP77Q6ZQR2 320 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 ACOT12Q8WYK0 555 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 C4orf45Q96LM5 186 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 DCBLD2Q96PD2 775 aa16.71■□□□□ 0.27
TRIM47-201ENST00000254816 RBM24Q9BX46 236 aaKnown RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 FOXD3Q9UJU5 478 aaPredicted RBP16.71■□□□□ 0.27
TRIM47-201ENST00000254816 INPP1P49441 399 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 MRPL28Q13084 256 aaKnown RBP16.7■□□□□ 0.26
TRIM47-201ENST00000254816 YIF1BQ5BJH7 314 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 MEIOBQ8N635 442 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF676Q8N7Q3 588 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 OR51A4Q8NGJ6 313 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 OR10S1Q8NGN2 331 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 SLAMF6Q96DU3 332 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 WACQ9BTA9 647 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 TMEM165Q9HC07 324 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 ACKR4Q9NPB9 350 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 NOX4Q9NPH5 578 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 NLKQ9UBE8 527 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 PIN1P1O15428 100 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 LYRM1O43325 122 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 SOX2P48431 317 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 IFITM2Q01629 132 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF57Q68EA5 555 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-201ENST00000254816 UNQ9370/PRO34162Q6UXP9 181 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 AAED1Q7RTV5 226 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 C20orf196Q8IYI0 205 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 ULBP2Q9BZM5 246 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 TP63Q9H3D4 680 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-201ENST00000254816 ASH2LQ9UBL3 628 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-201ENST00000254816 CLEC4AQ9UMR7 237 aa16.7■□□□□ 0.26
TRIM47-201ENST00000254816 A0A0B4J203 849 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 HMX3A6NHT5 357 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 ZNF879B4DU55 563 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 LANCL1O43813 399 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 CEACAM4O75871 244 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 UCHL1P09936 223 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 PLET1Q6UQ28 207 aa16.69■□□□□ 0.26
TRIM47-201ENST00000254816 TRMT10AQ8TBZ6 339 aaKnown RBP16.69■□□□□ 0.26
TRIM47-201ENST00000254816 HDHD2Q9H0R4 259 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms