RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.41□□□□□ -0.1
UBE3D-201ENST00000237186 ELMOD2Q8IZ81 293 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 NKAIN3Q8N8D7 197 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 OR10H5Q8NGA6 315 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 OR13C3Q8NGS6 347 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 OR6X1Q8NH79 312 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 NTNG2Q96CW9 530 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 SLAMF6Q96DU3 332 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 C1orf198Q9H425 327 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 PTGES2Q9H7Z7 377 aa14.41□□□□□ -0.1
UBE3D-201ENST00000237186 EXPH5Q8NEV8 1989 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 D6RAR5 112 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 TRAF3IP2O43734 574 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 KDM4BO94953 1096 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 IGHG1P01857 330 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 RAD52P43351 418 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ZFP36L1Q07352 338 aaKnown RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 IKZF1Q13422 519 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 RBMS2Q15434 407 aaKnown RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 INPP5JQ15735 1006 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 FAM109AQ8N4B1 249 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 CLEC1AQ8NC01 280 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 DACT3Q96B18 629 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ZBTB8AQ96BR9 441 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 OXGR1Q96P68 337 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ZNF700Q9H0M5 742 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 SCPEP1Q9HB40 452 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 BEX1Q9HBH7 125 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 RHBDD3Q9Y3P4 386 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 SPEGQ15772 3267 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 A0A087WZY1 265 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 IGHV1-45A0A0A0MS14 117 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 KLK3P07288 261 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ACSM4P0C7M7 580 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ZNF28P17035 718 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 DUSP3P51452 185 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 C19orf57Q0VDD7 668 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 HIST3H3Q16695 136 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ZNF626Q68DY1 528 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 FAAP20Q6NZ36 180 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 SLC25A47Q6Q0C1 308 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 CORO6Q6QEF8 472 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ADGRE4PQ86SQ3 457 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 MAML2Q8IZL2 1156 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 AGBL5Q8NDL9 886 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 NOXO1Q8NFA2 376 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 OR51A2Q8NGJ7 313 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 OR4C16Q8NGL9 310 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 SNAPC3Q92966 411 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 NECAB3Q96P71 396 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 ATG5Q9H1Y0 275 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 GPN1Q9HCN4 374 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 CENPMQ9NSP4 180 aa14.4□□□□□ -0.1
UBE3D-201ENST00000237186 GPN3Q9UHW5 284 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-201ENST00000237186 DOK2O60496 412 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 UMODP07911 640 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 MELTFP08582 738 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 AKAIN1P0CW23 69 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 DNASE1P24855 282 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 EXT1Q16394 746 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 KCNMB1Q16558 191 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 C6orf183Q5T699 404 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 SLC25A25Q6KCM7 469 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 C1orf210Q8IVY1 113 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 OR10S1Q8NGN2 331 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 OR6N1Q8NGY5 312 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 M1APQ8TC57 530 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 SORCS2Q96PQ0 1159 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 SLCO5A1Q9H2Y9 848 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 SLC23A1Q9UHI7 598 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
UBE3D-201ENST00000237186 CACNA1CQ13936 2221 aa14.39□□□□□ -0.11
UBE3D-201ENST00000237186 AQP7P3A6NL99 342 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 G3V3Q6 166 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 CREBL2O60519 120 aaPredicted RBP14.38□□□□□ -0.11
UBE3D-201ENST00000237186 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
UBE3D-201ENST00000237186 TTRP02766 147 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 CFIP05156 583 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 TPOP07202 933 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 RAB6AP20340 208 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 SDHBP21912 280 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 HTR2BP41595 481 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 SELENOPP49908 381 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 PER3P56645 1201 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 CLRN1P58418 232 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 ACTBP60709 375 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 ACTG1P63261 375 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 MC2RQ01718 297 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 CSRP2Q16527 193 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 KLHL24Q6TFL4 600 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 OPN5Q6U736 354 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 FAM198BQ6UWH4 519 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF813Q6ZN06 617 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 NLRC3Q7RTR2 1065 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 SLC36A1Q7Z2H8 476 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 GTPBP8Q8N3Z3 284 aaPredicted RBP14.38□□□□□ -0.11
UBE3D-201ENST00000237186 ZC3H10Q96K80 434 aaKnown RBP14.38□□□□□ -0.11
UBE3D-201ENST00000237186 OR5B2Q96R09 309 aa14.38□□□□□ -0.11
UBE3D-201ENST00000237186 KCNK15Q9H427 330 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms