RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 KLHDC8BQ8IXV7 354 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 ZNF629Q9UEG4 869 aaPredicted RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 CHRNA9Q9UGM1 479 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 CD80P33681 288 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 CDC20Q12834 499 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 STAC2Q6ZMT1 411 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 PLA2G12AQ9BZM1 189 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 IGHV3-15A0A0B4J1V0 119 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 EIF4E2O60573 245 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 APOA2P02652 100 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 OR10J4P0C629 311 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 RD3LP0DJH9 198 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 HRH1P35367 487 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 CA13Q8N1Q1 262 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 OR13C8Q8NGS7 320 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 ZFPM2Q8WW38 1151 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 GAREM1Q9H706 876 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 ASH2LQ9UBL3 628 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 FAM166BA8MTA8 275 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 UPK1AO00322 258 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 APOBEC1P41238 236 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 SNTB1Q13884 538 aaKnown RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 ZNF468Q5VIY5 522 aaPredicted RBP12.19□□□□□ -0.46
NEK4-201ENST00000233027 HIST2H3AQ71DI3 136 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 TMEM123Q8N131 208 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
NEK4-201ENST00000233027 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 HOXC11O43248 304 aaPredicted RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 CHRM2P08172 466 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 GSTP1P09211 210 aaKnown RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 FCGR2CP31995 323 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 DIO1P49895 249 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 GCNT2Q8N0V5 402 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 VN1R2Q8NFZ6 395 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 FXYD1O00168 92 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 OR2F2O95006 317 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 OR4E1P0C645 316 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 OR2F1Q13607 317 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.18□□□□□ -0.46
NEK4-201ENST00000233027 LINC00299Q6ZSB3 139 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 C1orf87Q8N0U7 546 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 SMIM19Q96E16 107 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 TXN2Q99757 166 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 BCO1Q9HAY6 547 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 KPTNQ9Y664 436 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 IFITM5A6NNB3 132 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 IGLV3-27P01718 113 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 MAML2Q8IZL2 1156 aaPredicted RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 OR51F2Q8NH61 342 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 TSLPQ969D9 159 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 SPNS1Q9H2V7 528 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 ZCCHC4Q9H5U6 513 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 AKAP11Q9UKA4 1901 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 CTSLP07711 333 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 HSD17B7P56937 341 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 NKG7Q16617 165 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 ACOT7LQ6ZUV0 252 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 SIRT6Q8N6T7 355 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
NEK4-201ENST00000233027 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
NEK4-201ENST00000233027 DVL1O14640 695 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 CYB5BO43169 146 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 DVL1P1P54792 670 aaPredicted RBP12.17□□□□□ -0.46
NEK4-201ENST00000233027 Q6ZRG5 221 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SSX9Q7RTT3 188 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SRRQ9GZT4 340 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 PLEKHF2Q9H8W4 249 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 MED9Q9NWA0 146 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 FLVCR1Q9Y5Y0 555 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 LINC01553A4QN01 128 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ASPDHA6ND91 283 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 OPRM1P35372 400 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 CCL11P51671 97 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 CDK5R1Q15078 307 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 UCN3Q969E3 161 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 PBX4Q9BYU1 374 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 GPR84Q9NQS5 396 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 MED29Q9NX70 200 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 KLK11Q9UBX7 282 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 EXO1Q9UQ84 846 aaKnown RBP12.17□□□□□ -0.46
NEK4-201ENST00000233027 DFFBO76075 338 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 IGHEP01854 428 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms