RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SRSF5Q13243 272 aaKnown RBP12.69□□□□□ -0.38
SF1-201ENST00000227503 NNATQ16517 81 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 FIGLAQ6QHK4 219 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 PRSS35Q8N3Z0 413 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 SULT4A1Q9BR01 284 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 SEC61A2Q9H9S3 476 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 TMEM100Q9NV29 134 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 URADA6NGE7 173 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 M0R036 132 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 CYR61O00622 381 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 PLGP00747 810 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 ZBTB25P24278 435 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 GABRA3P34903 492 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 PGDP52209 483 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 GGTLC2Q14390 218 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 DPY19L4Q7Z388 723 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 RD3Q7Z3Z2 195 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR4N2Q8NGD1 307 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR6N2Q8NGY6 317 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 AKR7LQ8NHP1 331 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 MARS2Q96GW9 593 aaKnown RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 MEGF10Q96KG7 1140 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 KXD1Q9BQD3 176 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 ALX4Q9H161 411 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR5AC2Q9NZP5 309 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 FREM3P0C091 2139 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 A0A1B0GV50 99 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 A6NCN8 305 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 CXorf65A6NEN9 183 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 PRKNO60260 465 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 ADAP1O75689 374 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 GPR75O95800 540 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 F13BP05160 661 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 PI3P19957 117 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 GPM6BQ13491 265 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 AWAT1Q58HT5 328 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 ZNF684Q5T5D7 378 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 KIRREL2Q6UWL6 708 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 SLC35D2Q76EJ3 337 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR51F2Q8NH61 342 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 C15orf40Q8WUR7 153 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 PHYHIPQ92561 330 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 TSACCQ96A04 125 aaPredicted RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 ZNF426Q9BUY5 554 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 LPAR3Q9UBY5 353 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
SF1-201ENST00000227503 ENTPD2Q9Y5L3 495 aa12.68□□□□□ -0.38
SF1-201ENST00000227503 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 H0Y8X5 98 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 SRPX2O60687 465 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 CD2P06729 351 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 CD14P08571 375 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 OR8U9P0C7N5 309 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 AGAP20933 346 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 RBM34P42696 430 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 DEFA6Q01524 100 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 EBPQ15125 230 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 RAB11BQ15907 218 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 KLHL26Q53HC5 615 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 FAM76BQ5HYJ3 339 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 TTLL10Q6ZVT0 673 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 SLC30A7Q8NEW0 376 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 OR8U1Q8NH10 309 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 SLC25A43Q8WUT9 341 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 NUDCD2Q8WVJ2 157 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 TRANK1O15050 2925 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 A0A1W2PPE2 198 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 H0YGG7 62 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 CDC40O60508 579 aaKnown RBP eCLIP12.67□□□□□ -0.381e-8■□□□□ 10.6
SF1-201ENST00000227503 AK1P00568 194 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 FOLR2P14207 255 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ZNF10P21506 573 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 PSMB6P28072 239 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 EIF2S3P41091 472 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 ACTR1BP42025 376 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ARF3P61204 181 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 ADAM8P78325 824 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 PDZD11Q5EBL8 140 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 PYY3Q5JQD4 70 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ZNF383Q8NA42 475 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 OR51A2Q8NGJ7 313 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 PMM1Q92871 262 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms