RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TMEM201Q5SNT2 666 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 NHLRC1Q6VVB1 395 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 TMEM184AQ6ZMB5 413 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 UQCC1Q9NVA1 299 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SULT2B1O00204 365 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ACTL6BO94805 426 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SLC10A1Q14973 349 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 GLIPR1L1Q6UWM5 242 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 VRK3Q8IV63 474 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 PRR22Q8IZ63 422 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SPICQ8N5J4 248 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ZNF485Q8NCK3 441 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 OR51A2Q8NGJ7 313 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 PTP4A1Q93096 173 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 HLA-CQ95604 372 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 FAM210BQ96KR6 192 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 HHIPQ96QV1 700 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ISG20L2Q9H9L3 353 aaKnown RBP9.56□□□□□ -0.88
VCL-201ENST00000211998 MED16Q9Y2X0 877 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 PTRH2Q9Y3E5 179 aaKnown RBP9.56□□□□□ -0.88
VCL-201ENST00000211998 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 TCRBV5S1A1TA0A578 114 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SLC5A10A0PJK1 596 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 C1orf105O95561 183 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ARG1P05089 322 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ADRA2CP18825 462 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 CRYBB2P43320 205 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SELENOPP49908 381 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 MTCP1P56278 107 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 CDK5Q00535 292 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ZNF273Q14593 569 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 COL19A1Q14993 1142 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ABLIM2Q6H8Q1 611 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 FAM173AQ9BQD7 235 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 WWTR1Q9GZV5 400 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 SIRT3Q9NTG7 399 aaPredicted RBP9.56□□□□□ -0.88
VCL-201ENST00000211998 OR5V1Q9UGF6 321 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 FBXO4Q9UKT5 387 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
VCL-201ENST00000211998 EPXP11678 715 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 HIST1H1TP22492 207 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 CD38P28907 300 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 HOXA9P31269 272 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 NOVA1P51513 510 aaKnown RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 RAG2P55895 527 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 TGFBR3Q03167 851 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 IKZF1Q13422 519 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 ACOT6Q3I5F7 207 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 FAM27D1Q5T7N8 215 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 DPY19L2P2Q6ZN68 376 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 MOB3CQ70IA8 216 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 LHX4Q969G2 390 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 LYSMD1Q96S90 227 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 MTCH1Q9NZJ7 389 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 GOLT1BQ9Y3E0 138 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 A0A1W2PNV4 684 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CTNSO60931 367 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 GLI4P10075 376 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 ARG2P78540 354 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 IFITM2Q01629 132 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 IHHQ14623 411 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 GPNMBQ14956 572 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 SMAD2Q15796 467 aaKnown RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 NKAIN4Q8IVV8 208 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 MARCH1Q8TCQ1 289 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 RASD2Q96D21 266 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 HIPK2Q9H2X6 1198 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 OR14J1Q9UGF5 321 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CBLCQ9ULV8 474 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 ANKRD30BLA7E2S9 258 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 GLCEO94923 617 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 NDUFB6O95139 128 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CHRM2P08172 466 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 PMCHP20382 165 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CSNK1A1P48729 337 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 HSD17B7P56937 341 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 GRB2P62993 217 aaKnown RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 LGALSLQ3ZCW2 172 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 SLC35D3Q5M8T2 416 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 FAM109BQ6ICB4 259 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 SEZ6L2Q6UXD5 910 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 FAM122AQ96E09 287 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 PHYHIPLQ96FC7 376 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 ABHD6Q9BV23 337 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 FGF20Q9NP95 211 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 ACAD8Q9UKU7 415 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 TNFSF4P23510 183 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 AVPR2P30518 371 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CTSCP53634 463 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CLDN2P57739 230 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 NKG7Q16617 165 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 OR5K2Q8NHB8 316 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 PFN4Q8NHR9 129 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 IL22RA2Q969J5 263 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 SEH1LQ96EE3 360 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 NKX3-1Q99801 234 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms