RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 COMTD1Q86VU5 262 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 D2HGDHQ8N465 521 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 STEAP2Q8NFT2 490 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 NINJ1Q92982 152 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 MICU1Q9BPX6 476 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.52
HDAC7-201ENST00000080059 SYT3Q9BQG1 590 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
HDAC7-201ENST00000080059 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 STMND1H3BQB6 276 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 OIP5O43482 229 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 MSR1P21757 451 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 DCTDP32321 178 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 ATP1B3P54709 279 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 BPHLQ86WA6 291 aaPredicted RBP11.82□□□□□ -0.52
HDAC7-201ENST00000080059 SGPP2Q8IWX5 399 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 TRMT61AQ96FX7 289 aaKnown RBP11.82□□□□□ -0.52
HDAC7-201ENST00000080059 TSPAN32Q96QS1 320 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 NEUROG3Q9Y4Z2 214 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 ROS1P08922 2347 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 SGCEO43556 437 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 STK17BO94768 372 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 ZNF44P15621 663 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 DDOSTP39656 456 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 LIMS1P48059 325 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 CLDN6P56747 220 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 BATF2Q8N1L9 274 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 C11orf40Q8WZ69 217 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 FER1L6-AS2Q96M78 137 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 CCL4P13236 92 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
HDAC7-201ENST00000080059 PI4KAP42356 2102 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 IFITM3Q01628 133 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 ZNF85Q03923 595 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 GNMTQ14749 295 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 OR10K1Q8NGX5 313 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 DCUN1D4Q92564 292 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 OXGR1Q96P68 337 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 OCIAD1Q9NX40 245 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 RAB22AQ9UL26 194 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
HDAC7-201ENST00000080059 FNDC1Q4ZHG4 1894 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 POM121CA8CG34 1229 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SNAPC5O75971 98 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 MPZL1O95297 269 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 C3P1Q6ZMU1 363 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 MEX3BQ6ZN04 569 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 ATG4DQ86TL0 474 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 NPEPL1Q8NDH3 523 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 BHLHE23Q8NDY6 225 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 AICDAQ9GZX7 198 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 COQ3Q9NZJ6 369 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 ZNF35P13682 527 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SLC25A1P53007 311 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 UBE2MP61081 183 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 BTG1P62324 171 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 BEND4Q6ZU67 534 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SCARF2Q96GP6 870 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 MENTQ9BUN1 341 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 TWSG1Q9GZX9 223 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 METTL9Q9H1A3 318 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 A6NJ64 397 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 ANKRD30BLA7E2S9 258 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 HSPB6O14558 160 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 ABOP16442 354 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 CCL11P51671 97 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 IL1F10Q8WWZ1 152 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 PPA2Q9H2U2 334 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 GDF2Q9UK05 429 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 R4GMQ9 66 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 IMPA2O14732 288 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 TSPAN9O75954 239 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SLC25A30Q5SVS4 291 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 LSRQ86X29 649 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-201ENST00000080059 CARFQ8N187 725 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 OR4D9Q8NGE8 314 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
HDAC7-201ENST00000080059 TRAPPC4Q9Y296 219 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms