RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CENPMQ9NSP4 180 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 PRODH2Q9UF12 536 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 OR14I1A6ND48 311 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 H0YIG0 161 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 SULT2B1O00204 365 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 NDUFA2O43678 99 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 FADS1O60427 444 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 CD2P06729 351 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 IGFBP3P17936 291 aaPredicted RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 CD96P40200 585 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 CASRP41180 1078 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 EIF1AXP47813 144 aaKnown RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 AKR1D1P51857 326 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 DMRTC1Q5HYR2 192 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 FDX2Q6P4F2 183 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 CBLN2Q8IUK8 224 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 TMEM151BQ8IW70 566 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 LINC00518Q8N0U6 118 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 OR2I1PQ8NGU4 316 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 PAQR8Q8TEZ7 354 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 ASB12Q8WXK4 309 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 SPACA5Q96QH8 159 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 FAM117AQ9C073 453 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 TCRBV21S2A2A0A5A6 115 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 OR2AT4A6NND4 320 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 DISC1C4P0D8 188 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 ZBTB25P24278 435 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 CD1CP29017 333 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 GFERP55789 205 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 IL13RA1P78552 427 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 ELOCQ15369 112 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 FGGYQ96C11 551 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 TSNAXQ99598 290 aaKnown RBP12.57□□□□□ -0.4
USH1C-201ENST00000005226 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 SOHLH2Q9NX45 425 aa12.57□□□□□ -0.4
USH1C-201ENST00000005226 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PHYHO14832 338 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 GNB3P16520 340 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 RAB3AP20336 220 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 SMAD2Q15796 467 aaKnown RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 RNASE10Q5GAN6 216 aaKnown RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 ACOT7LQ6ZUV0 252 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 TMEM17Q86X19 198 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 CNTD2Q9H8S5 307 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 SLC17A5Q9NRA2 495 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 GDF2Q9UK05 429 aaPredicted RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 PCDH15Q96QU1 1955 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 CEP290O15078 2479 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 RTTNQ86VV8 2226 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 TRAV36DV7A0A075B6V5 113 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 KIR2DS5A0A0G2JLQ3 304 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 A0A0G2JNG1 304 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 KIR2DS3K7RE56 304 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 ABCD4O14678 606 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 OR2F2O95006 317 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 WDPCPO95876 746 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PMP2P02689 132 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 CD74P04233 296 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 CTHP32929 405 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 HRH1P35367 487 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PPICP45877 212 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PRKXP51817 358 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 EFNA3P52797 238 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 FGL1Q08830 312 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 RIPPLY1Q0D2K3 151 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 OR2F1Q13607 317 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 KIR2DS5Q14953 304 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PAN3Q58A45 887 aaKnown RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 PTCRAQ6ISU1 281 aaPredicted RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 C16orf47Q6ZP98 133 aaPredicted RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 MAMDC2Q7Z304 686 aaPredicted RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 DCXRQ7Z4W1 244 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 ZNF519Q8TB69 540 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 TGM7Q96PF1 710 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 ZNF587Q96SQ5 575 aaPredicted RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 FOXQ1Q9C009 403 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 SELENOIQ9C0D9 397 aa12.56□□□□□ -0.4
USH1C-201ENST00000005226 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
USH1C-201ENST00000005226 LDLRAD4O15165 306 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 MELTFP08582 738 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 PGAM2P15259 253 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms