RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CPNE5Q9HCH3 593 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 MBD1Q9UIS9 605 aaPredicted RBP9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 B9D1Q9UPM9 204 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 R4GMQ9 66 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 LRP5LA4QPB2 252 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 BHLHE40O14503 412 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 BMP5P22003 454 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 AGFG1P52594 562 aaKnown RBP9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 SOX8P57073 446 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 SRPXP78539 464 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 GPR157Q5UAW9 335 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 DCUN1D4Q92564 292 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 APOBEC3DQ96AK3 386 aaPredicted RBP9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 PDCD1LG2Q9BQ51 273 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 GPR84Q9NQS5 396 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 GDF2Q9UK05 429 aaPredicted RBP9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 RCE1Q9Y256 329 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 FOCADQ5VW36 1801 aa9.36□□□□□ -0.91
NIPAL3-201ENST00000003912 TCRBV5S2A0A599 114 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SHISA8B8ZZ34 492 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 FXYD1O00168 92 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ABCD4O14678 606 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TUSC2O75896 110 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SNRPD2P62316 118 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 PMPCAQ10713 525 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 PAQR6Q6TCH4 344 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZDHHC23Q8IYP9 409 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 C12orf45Q8N5I9 185 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 OR51D1Q8NGF3 324 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SLC25A31Q9H0C2 315 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ACKR4Q9NPB9 350 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 GLRX2Q9NS18 164 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF355PQ9NSJ1 428 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 HAO2Q9NYQ3 351 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ANKRD61A6NGH8 418 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 GREM1O60565 184 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 MT-ND4P03905 459 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 GLAP06280 429 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 CAMLGP49069 296 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SPINK14Q6IE38 97 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 COMTD1Q86VU5 262 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TAAR8Q969N4 342 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 RASL10BQ96S79 203 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 EXOSC3Q9NQT5 275 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 CLEC2DQ9UHP7 191 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 CEPT1Q9Y6K0 416 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZC3H12DA2A288 527 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ANKRD34BA5PLL1 514 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF616Q08AN1 781 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 MRGPREQ86SM8 312 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 OR10D3Q8NH80 312 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 DNASE2BQ8WZ79 361 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 MMP25Q9NPA2 562 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 UBQLN2Q9UHD9 624 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 PDGFBP01127 241 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF728P0DKX0 622 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ECI1P42126 302 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 ZNF141Q15928 474 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 APOOLQ6UXV4 268 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 CALHM3Q86XJ0 350 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 OR1J1Q8NGS3 322 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 S100PBPQ96BU1 408 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TSSK2Q96PF2 358 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 C12orf10Q9HB07 376 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 NECAP2Q9NVZ3 263 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TFP02787 698 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TMIGD3P0DMS9 266 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TNFRSF1AP19438 455 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 WNT3P56703 355 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 RAB1AP62820 205 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 RHEBQ15382 184 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 B3GNTL1Q67FW5 361 aaPredicted RBP9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 GCNT2Q8N0V5 402 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 OR4A16Q8NH70 328 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 C3orf49Q96BT1 292 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SULT4A1Q9BR01 284 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 PBOV1Q9GZY1 135 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 RGCCQ9H4X1 137 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TMEM100Q9NV29 134 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 SIRT5Q9NXA8 310 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 GFOD1Q9NXC2 390 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 TAS2R4Q9NYW5 299 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
NIPAL3-201ENST00000003912 MAP1BP46821 2468 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 HS3ST1O14792 307 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 GIFP27352 417 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 MFGE8Q08431 387 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SLC17A1Q14916 467 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 TOMM34Q15785 309 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 DCAF10Q5QP82 559 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 PLXDC2Q6UX71 529 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 RBMS3Q6XE24 437 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SLC22A18ASQ8N1D0 253 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms