RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Nhlrc2Q8BZW8 725 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rln3Q8CHK2 141 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cacnb4Q8R0S4 519 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rfc3Q8R323 356 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr1377Q8VGH1 307 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Pot1Q91WC1 640 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Abtb1Q99LJ2 478 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Utp23Q9CX11 249 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Abcb8Q9CXJ4 717 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Tmem269Q9D4Y8 254 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 ClpxQ9JHS4 634 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gab1Q9QYY0 695 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Bloc1s6Q9R0C0 172 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 H2afb1S4R1E0 115 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 H2afb3S4R1G7 115 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ncor2Q9WU42 2472 aaKnown RBP18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Tmem8bB1AWJ5 472 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rdh8D3Z6W3 317 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Muc3E9PWP7 378 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Wdfy1E9Q4P1 410 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr370E9Q848 314 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Creg1O88668 220 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Sf3b6P59708 125 aaKnown RBP18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Crybb2P62696 205 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 JPT1P97825 154 aaKnown RBP18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Orm1Q60590 207 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gpr135Q7TQP2 457 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ahcyl1Q80SW1 530 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 SowahbQ8BZW2 760 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Adhfe1Q8R0N6 465 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr1226Q8VGM5 310 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Egln3Q91UZ4 239 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Emc6Q9CQW0 110 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Q9CYS6 286 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rasal1Q9Z268 799 aa18.9■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr576A0A0G2JFH3 312 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr655E9Q252 308 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Gm16506F7ANP4 213 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1121L7MTT1 314 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Raet1cO08604 253 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tuba1bP05213 451 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rps25P62852 125 aaKnown RBP18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tuba1aP68369 451 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Atf4Q06507 349 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Fstl4Q5STE3 841 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp866Q6PGD2 520 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr270Q7TS19 314 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Frmd6Q8C0V9 622 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tmcc3Q8R310 477 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1143Q8VEU8 314 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1277Q8VF41 303 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Lrch4Q921G6 680 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tspan2Q922J6 221 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr642Q924X8 314 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Pole4Q9CQ36 118 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rnf128Q9D304 428 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Asf1bQ9DAP7 202 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Dnaja4Q9JMC3 397 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Prok2Q9QXU7 128 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Decr2Q9WV68 292 aa18.89■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Trav6-7-dv9A0A075B639 125 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Trav12-2A0N8N6 114 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zyg11aA2BFL2 627 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 8030474K03RikE9Q4Y8 554 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp988F6VKC7 633 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Ankrd65F6YK91 380 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Fbxw25F7C9P2 466 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp989H3BLB0 661 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Gm21411J3KMS0 136 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Pou3f2P31360 445 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Gm7030Q0WXH6 285 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp987Q32P14 633 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Gm6899Q3USS0 134 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Nptx1Q62443 432 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 St6gal1Q64685 403 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp157Q6PCM4 567 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 F830045P16RikQ8BJ95 487 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 LsampQ8BLK3 341 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 SprnQ8BWU1 147 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Taldo1Q93092 337 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Ctag2Q9D9S4 219 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Sorcs1Q9JLC4 1167 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Ramp3Q9WUP1 147 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr1066A2AK62 313 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Susd1E9Q3H4 752 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Maml2F6U238 1170 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Zfp141G3UY09 685 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 H3BKT1 185 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Itln1O88310 313 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rab12P35283 243 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Ctbp2P56546 445 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Doc2bP70169 412 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Srsf4Q8VE97 489 aaKnown RBP18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 PnpoQ91XF0 261 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Mrpl54Q9CPW3 135 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Tex29Q9DA77 186 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Olfr934Q9EQ87 310 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Slc35a2Q9R0M8 390 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 Rgs6Q9Z2H2 472 aa18.88■□□□□ 0.61
Ccdc88a-202ENSMUST00000109477 PtprbB2RU80 1998 aa18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms