RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Rab8aP55258 207 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Milr1Q3TB92 246 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 MENTQ569E4 350 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Mylk4Q5SUV5 386 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Flot2Q60634 428 aaKnown RBP10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Il18r1Q61098 537 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Il10rbQ61190 349 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Cd55bQ61476 407 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr1282Q7TQY5 305 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr645Q7TRQ1 315 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Fam53bQ8BGR5 422 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Pck2Q8BH04 640 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Csnk1a1Q8BK63 337 aaKnown RBP10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Tmsb15lQ8C0W0 80 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rab36Q8CAM5 267 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Coq6Q8R1S0 476 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Utp4Q8R2N2 686 aaKnown RBP10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Wipi1Q8R3E3 446 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Ddb2Q99J79 432 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Arl4dQ99PE9 201 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Dppa5aQ9CQS7 118 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 MeiobQ9D513 470 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Arrdc2Q9D668 407 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Tln2Q71LX4 2375 aa10.55□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Ighv3-4A0A0A6YXF1 117 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Igkv13-84A0A140T8N3 115 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Gm13124A2A752 406 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2abC0HKE1 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2acC0HKE2 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2adC0HKE3 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2aeC0HKE4 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2agC0HKE5 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2aiC0HKE6 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2anC0HKE7 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2aoC0HKE8 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2apC0HKE9 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Zfp648D3Z0W3 525 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Prss32E9Q409 334 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Gm20481G3UXK4 153 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Vmn1r103K7N6X7 305 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Vmn1r122K7N726 305 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Vmn1r151L7N288 305 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 GzmmO08643 264 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 GzmeP08884 248 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Il7rP16872 459 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Gna13P27601 377 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 VipP32648 170 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rpl27P61358 136 aaKnown RBP10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hdac2P70288 488 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Slc25a26Q5U680 274 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Xlr3aQ60595 226 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 AdipoqQ60994 247 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Serpinf2Q61247 491 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Cd47Q61735 303 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Spock1Q62288 442 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Prrg3Q6PAQ9 231 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Camk2dQ6PHZ2 499 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 DcstampQ7TNJ0 470 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr107Q7TRK4 309 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Cpeb2Q812E0 521 aaKnown RBP10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist3h2aQ8BFU2 130 aaKnown RBP10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rhbdd3Q8BP97 385 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Tigd4Q8BUZ3 513 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2afQ8CGP5 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2ahQ8CGP6 128 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Hist1h2akQ8CGP7 130 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Cnppd1Q8K158 407 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 H2afjQ8R1M2 129 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rhbdl1Q8VC82 373 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr493Q8VEW5 314 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr434Q8VF17 321 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr47Q8VF18 321 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr644Q8VH21 314 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Scpep1Q920A5 452 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rcbtb2Q99LJ7 551 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Pga5Q9D106 387 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Ttc25Q9D4B2 624 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Sec23bQ9D662 767 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Tex22Q9D9U4 189 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 HgfacQ9R098 653 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Nupr1Q9WTK0 80 aa10.54□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr739E9Q1P0 309 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rdh16f1E9Q9P8 317 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Trav13d-3J3QMG8 112 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Raet1aO08602 253 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Raet1bO08603 253 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 C1qbP14106 253 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Akr1b7P21300 316 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 M6prP24668 278 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Htr1bP28334 386 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Oprl1P35377 367 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Dlx2P40764 332 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Prop1P97458 223 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Olfr90Q0VEL5 310 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Znf691Q3TDE8 283 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 NmsQ5H8A1 153 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Rasl10bQ5SSG5 203 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Snap91Q61548 901 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 EdnraQ61614 427 aa10.53□□□□□ -0.72
Ccdc28a-202ENSMUST00000080860 Bhlhb9Q6PB60 539 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms