RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 RoraP51448 523 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Hist1h2baP70696 127 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 G6pd2P97324 513 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Fam220aQ3ZN08 260 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Tnfrsf8Q60846 498 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pxdc1Q8JZU6 231 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 MetrnlQ8VE43 311 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1411Q8VFC4 323 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1Q8VGI1 314 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Arpc5Q9CPW4 151 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gpx8Q9D7B7 209 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr705Q9EPF7 316 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr933Q9EQA0 308 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm14418A2ARR6 358 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm14322A2AW66 358 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm37240E9QAY5 252 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Sstr5O08858 362 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Hs3st6Q5GFD5 342 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Fam46cQ5SSF7 391 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Foxd3Q61060 465 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1065Q7TR70 313 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pced1bQ8BGX1 433 aaKnown RBP15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Q8BHG2 160 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Q8BTC1 67 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 RhofQ8BYP3 211 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Scrt1Q99M85 348 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm14597A2CFG5 200 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm21767J3QPV5 180 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Grcc10O35127 126 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pcdh19Q80TF3 1145 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Vmn1r210Q8R274 306 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr799Q8VGI7 311 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr73Q920P2 313 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pcyt2Q922E4 404 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Fam122cQ9D5J5 180 aa15.29■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Birc7A2AWP0 285 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1335B2RVY8 335 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Chrna10B2RX82 447 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Vmn1r157E9Q069 297 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Zfp961E9Q4R5 444 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Vmn1r139E9Q8L6 297 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Vmn1r112G3UY48 297 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Slc18a3O35304 530 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gstp2P46425 210 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Art5P70352 309 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gcnt7Q3V3K7 433 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr884Q7TRE1 309 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr309Q7TS01 308 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Rxfp3Q8BGE9 472 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gper1Q8BMP4 375 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr558Q8VGZ7 317 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 HaghQ99KB8 309 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 GnmtQ9QXF8 293 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Zfp352A2AML7 551 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm5901D3YVJ1 333 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Raet1cO08604 253 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 P10404 641 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Xrcc1Q60596 631 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr800Q8VFH7 311 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1389Q8VGX0 311 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Actr10Q9QZB7 417 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Usp18Q9WTV6 368 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Gm9047B9EJX3 177 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Zmat3O54836 290 aaKnown RBP15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Ltb4rO88855 351 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Msx1P13297 303 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Nkx2-2P42586 273 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Lrrc75bQ7TPD7 306 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Fjx1Q8BQB4 450 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Plekho2Q8K124 495 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 FRRS1Q8K385 592 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Lrrc61Q8R2R5 259 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Abhd14bQ8VCR7 210 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pcdhgb5Q91XX5 926 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 PmpcaQ9DC61 524 aa15.28■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Slc16a5G5E8K6 468 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Kcnj3P63250 501 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Smad5P97454 465 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 D11Wsu47eQ6PIX9 558 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 H2-M2Q6W9L1 343 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 HaaoQ78JT3 286 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Scgb1c1Q7M742 95 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Pif1Q80SX8 650 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Kiaa1456Q80WQ4 447 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 GskipQ8BGR8 139 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Tmem108Q8BHE4 574 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Fbxo45Q8K3B1 286 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Agpat2Q8K3K7 278 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Olfr1044Q8VGR9 314 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Tinagl1Q99JR5 466 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Lsm7Q9CQQ8 103 aaKnown RBP15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 2010005H15RikQ9D8D6 97 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Tas2r105Q9JKT4 300 aa15.27■□□□□ 0.04
Ctcf-201ENSMUST00000005841 Lilra6A0A0B4J1F3 663 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1432A0A140LHS7 346 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tex54G3UW99 86 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gpr33O88416 339 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Serf1O88892 62 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cd74P04441 279 aa15.27■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Wnt6P22727 364 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms