RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm21119Q8C646 350 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Gpr1Q8K087 353 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc35e4Q8K3D6 351 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Srpx2Q8R054 468 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Spryd4Q91WK1 207 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Dyrk3Q922Y0 586 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Ccdc167Q9D162 97 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Htra3Q9D236 459 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Mrps15Q9DC71 258 aaKnown RBP14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Pcnx3Q8VI59 2028 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Col4a2P08122 1707 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm13102A2ASJ3 519 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 4930451I11RikE9Q9R3 111 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 GlulP15105 373 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Man1c1Q6NXK9 625 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1133Q7TR44 313 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Rxfp3Q8BGE9 472 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Lpar4Q8BLG2 370 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 ShfQ8CG80 238 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc35a3Q8R1T4 326 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 OgfrQ99PG2 633 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Mllt1Q9ERL0 547 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Eif3gQ9Z1D1 320 aaKnown RBP14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Ino80eA0A0U1RP99 260 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1214A2ATG3 311 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r115K7N6Y3 295 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm8050L7N2E3 205 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Abcd4O89016 606 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Dpp4P28843 760 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Sec61a1P61620 476 aaKnown RBP14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Mccc2Q3ULD5 563 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Pptc7Q6NVE9 310 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Shc4Q6S5L9 626 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 PigvQ7TPN3 493 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Zar1Q80SU3 361 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Fam98bQ80VD1 429 aaKnown RBP14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Vrk1Q80X41 440 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 CyrenQ8BHZ5 157 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 2810021J22RikQ8BIB6 539 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Gtpbp8Q9CY28 285 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 BambiQ9D0L6 260 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 1700034E13RikQ9D2T6 108 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Entpd4Q9DBT4 613 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 RetnlaQ9EP95 111 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr27Q9EQ90 311 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Slco1b2Q9JJL3 689 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc39a1Q9QZ03 324 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc25a43A2A3V2 341 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Wisp1O54775 367 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Crisp2P16563 243 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Tnfrsf26P83626 204 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Defb41Q30KP6 65 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm8332Q3UTA4 144 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Timm8a2Q4FZG7 97 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Drd1Q61616 446 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc25a47Q6IS41 310 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1500Q7TQQ3 311 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Ttc29Q80VM3 471 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Tmem198bQ8CFU0 350 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1487Q8VFQ6 315 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Rpl22l1Q9D7S7 122 aaKnown RBP14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Tysnd1Q9DBA6 568 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm7697A0A0J9YUH2 350 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm9495A0A0J9YUZ3 350 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Smim22J3QP37 91 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Defb25Q30KN8 71 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Plppr1Q8BFZ2 325 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Mettl27Q8BGM4 238 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Rft1Q8C3B8 541 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1241Q8VF91 314 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Lrrc26Q91W20 331 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Pno1Q9CPS7 248 aaKnown RBP14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Ankrd22Q9D3J5 191 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Marveld3Q9D956 376 aa14.87□□□□□ -0.03
Shh-201ENSMUST00000002708 Sult6b2B7ZWN4 290 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 C2cd6E9Q152 557 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Cdh19E9Q3A7 770 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 DgkaO88673 730 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 AdaP03958 352 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Anxa2P07356 339 aaKnown RBP14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 ArsbP50429 534 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Alg11Q3TZM9 492 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Ddhd2Q80Y98 699 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Comtd1Q8BIG7 262 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Ap3s2Q8BSZ2 193 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Nudt9Q8BVU5 350 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r228Q8R2A7 333 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Abhd14bQ8VCR7 210 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Med28Q920D3 178 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr713Q920G5 324 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Stoml2Q99JB2 353 aaKnown RBP14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 SvbpQ99LQ4 66 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 TpbpbQ9CQC0 121 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Sult1c2Q9D939 296 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Kiaa0141Q9DCV6 510 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Lgals8Q9JL15 316 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 A0A286YDP4 300 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Cdc20bD3Z3I0 519 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm21560D3Z7A4 205 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1511E9PWU0 318 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms