RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 KLK3P07288 261 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 H2BFMP0C1H6 154 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 IGFBP3P17936 291 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 VEGFCP49767 419 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 GUCA2AQ02747 115 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 FAM166AQ6J272 317 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 THRSPQ92748 146 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 NXT1Q9UKK6 140 aaKnown RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 HS3ST3B1Q9Y662 390 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 TMEM272A0A1B0GTI8 110 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 GGT3PA6NGU5 568 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 FAM47E-STBD1D6RA91 191 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 G3V3Y1 287 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CER1O95813 267 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 ALDOBP05062 364 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CFPP27918 469 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CDAP32320 146 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CLRN1P58418 232 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 AP3S2P59780 193 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 SPOCK1Q08629 439 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 MFAP5Q13361 173 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 TMEM176BQ3YBM2 270 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CD276Q5ZPR3 534 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 BPHLQ86WA6 291 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 C1orf210Q8IVY1 113 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 OR10S1Q8NGN2 331 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 RNF133Q8WVZ7 376 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 SLC25A28Q96A46 364 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 IMMP1LQ96LU5 166 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 GAL3ST1Q99999 423 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 SLA2Q9H6Q3 261 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 EMC7Q9NPA0 242 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 HHLA2Q9UM44 414 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 LOC100289279A0A1B0GTE1 492 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CIB4A0PJX0 185 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 MEIS3P1A6NDR6 274 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 ARPC1BO15143 372 aaKnown RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 TRAF3IP2O43734 574 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CD2P06729 351 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 FCER2P06734 321 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 PSMB1P20618 241 aaKnown RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 DNASE1L1P49184 302 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 SCAND1P57086 179 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 MRPS10P82664 201 aaKnown RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 NDUFA5Q16718 116 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 HYAL4Q2M3T9 481 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 OLFML2AQ68BL7 652 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-229ENST00000641891 NOXO1Q8NFA2 376 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 OR10H5Q8NGA6 315 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 SLAMF6Q96DU3 332 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 RBP7Q96R05 134 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 ZNF700Q9H0M5 742 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 CKLFQ9UBR5 152 aa15.11■□□□□ 0.01
PHGDH-229ENST00000641891 MED12Q93074 2177 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 TRAV18A0A075B6X5 111 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 DCDC2BA2VCK2 349 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 PEX14O75381 377 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 LDOC1O95751 146 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-229ENST00000641891 HRGP04196 525 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 PGA4P0DJD7 388 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 PGA3P0DJD8 388 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 CCL3P10147 92 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 RAG2P55895 527 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 MC2RQ01718 297 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 LINC00303Q3SY05 128 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 GLYATL3Q5SZD4 288 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 CFAP77Q6ZQR2 320 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 DNM1P46Q6ZS02 220 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 SEC61A2Q9H9S3 476 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 MYEF2Q9P2K5 600 aaKnown RBP15.1■□□□□ 0.01
PHGDH-229ENST00000641891 CYB5R1Q9UHQ9 305 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
PHGDH-229ENST00000641891 HSPB11Q9Y547 144 aa15.1■□□□□ 0.01
PHGDH-229ENST00000641891 MRPS18BQ9Y676 258 aaKnown RBP15.1■□□□□ 0.01
PHGDH-229ENST00000641891 C9J4A7 227 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 TP53I11O14683 189 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 CYC1P08574 325 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 FSTP19883 344 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ACHEP22303 614 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 LAP3P28838 519 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 DUSP3P51452 185 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ELFN2Q5R3F8 820 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 Q6ZTK2 550 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ATG5Q9H1Y0 275 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 CDCP1Q9H5V8 836 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ZFP64Q9NPA5 681 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 FAM206AQ9NX38 181 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 NAP1L6A6NFF2 107 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 SSNA1O43805 119 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ISG15P05161 165 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ZP1P60852 638 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 TRA2AQ13595 282 aaKnown RBP eCLIP15.09■□□□□ 0.01
PHGDH-229ENST00000641891 PCGF3Q3KNV8 242 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 GLT8D1Q68CQ7 371 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 PLCZ1Q86YW0 608 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 DEDD2Q8WXF8 326 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ZC3H10Q96K80 434 aaKnown RBP15.09■□□□□ 0.01
PHGDH-229ENST00000641891 GNRHR2Q96P88 292 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms