RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 B9A039 149 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 MS4A18H0YCH9 400 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 XKRYO14609 159 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 IDH3BO43837 385 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 PRKYO43930 277 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 MPZL2O60487 215 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 FZD7O75084 574 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 VAMP5O95183 116 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 BCL10O95999 233 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TACSTD2P09758 323 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TSPAN19P0C672 248 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 HLA-DOBP13765 273 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 IFNGR1P15260 489 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 HIST1H1CP16403 213 aaKnown RBP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 PAICSP22234 425 aaKnown RBP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 MYF6P23409 242 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 GIFP27352 417 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 SDHAP31040 664 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 SELENOPP49908 381 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 PPOXP50336 477 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 P2RY4P51582 365 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 CDH15P55291 814 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 RPL27P61353 136 aaKnown RBP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 HGFACQ04756 655 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 EFNB3Q15768 340 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 MS4A18Q3C1V0 323 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 GPR139Q6DWJ6 353 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 ANKRD16Q6P6B7 361 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 SLC35D2Q76EJ3 337 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 HDDC2Q7Z4H3 204 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 PXKQ7Z7A4 578 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 LINC01356Q8N9X3 169 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 LRRC75AQ8NAA5 344 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 SDR9C7Q8NEX9 313 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 OR9K2Q8NGE7 335 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 OR52E2Q8NGJ4 325 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 OR1K1Q8NGR3 316 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 OR4K13Q8NH42 304 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 CNIH3Q8TBE1 160 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TMEM45BQ96B21 275 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TSPAN32Q96QS1 320 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 KCNS3Q9BQ31 491 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TXNIPQ9H3M7 391 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TPK1Q9H3S4 243 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 METTL17Q9H7H0 456 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 NRIP3Q9NQ35 241 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 PARPBPQ9NWS1 579 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 CLN6Q9NWW5 311 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 MED29Q9NX70 200 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 B3GAT1Q9P2W7 334 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 KLHL21Q9UJP4 597 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF346Q9UL40 294 aaKnown RBP8.64□□□□□ -1.03
PHGDH-222ENST00000641587 LRCH1Q9Y2L9 728 aa8.64□□□□□ -1.03
PHGDH-222ENST00000641587 TRRAPQ9Y4A5 3859 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 TMEM129A0AVI4 362 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF503-AS2A6NEH8 195 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 A6NIZ1 184 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF726A6NNF4 738 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ARPC3O15145 178 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 SURF4O15260 269 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 DENRO43583 198 aaKnown RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 TRAF3IP2O43734 574 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 AKAP8O43823 692 aaKnown RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 UPK3AO75631 287 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 SLC2A10O95528 541 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 RENP00797 406 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 IGHMP01871 453 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CRYAAP02489 173 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 EGR1P18146 543 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 THBS4P35443 961 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CHN2P52757 468 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 BIDP55957 195 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CLDN17P56750 224 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 RAP1BP61224 184 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 RAP1AP62834 184 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CD47Q08722 323 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 MAD2L1BPQ15013 274 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CARD17Q5XLA6 110 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 FAM205BPQ63HN1 556 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 LEG1Q6P5S2 330 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 USP51Q70EK9 711 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ENTHD1Q8IYW4 607 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF786Q8N393 782 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 POMGNT2Q8NAT1 580 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CYB561A3Q8NBI2 242 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF540Q8NDQ6 660 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 TMEM163Q8TC26 289 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 ASB10Q8WXI3 467 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 BCL2L2Q92843 193 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 UBE2FQ969M7 185 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 DOK1Q99704 481 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 SF3B5Q9BWJ5 86 aaKnown RBP8.63□□□□□ -1.03
PHGDH-222ENST00000641587 RAB1BQ9H0U4 201 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 NARFLQ9H6Q4 476 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 LPAR2Q9HBW0 351 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 CMC2Q9NRP2 79 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms