RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SYT9Q86SS6 491 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 C1orf174Q8IYL3 243 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 RAB39BQ96DA2 213 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 POFUT1Q9H488 388 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 ANKRD19PQ9H560 264 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 G6PC2Q9NQR9 355 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 IL20RAQ9UHF4 553 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 KLHL21Q9UJP4 597 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 NDRG4Q9ULP0 352 aaKnown RBP11.81□□□□□ -0.52
LINC00339-211ENST00000641009 TMEM5Q9Y2B1 443 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 H3BSA7 217 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 PLPP2O43688 288 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 TIMM8AO60220 97 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 RGS9O75916 674 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 DIRAS1O95057 198 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 AVPP01185 164 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 IGHV2-5P01817 119 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 H1F0P07305 194 aaKnown RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 ANPEPP15144 967 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 HTR5AP47898 357 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 LIMS1P48059 325 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 PSME3P61289 254 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 PSG7Q13046 419 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 KRR1Q13601 381 aaKnown RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 FAM86B1Q8N7N1 296 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 RAB1CQ92928 201 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 ELAC2Q9BQ52 826 aaKnown RBP11.8□□□□□ -0.52
LINC00339-211ENST00000641009 SYT4Q9H2B2 425 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 RERGLQ9H628 205 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 RPS6KA6Q9UK32 745 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 SIGLEC7Q9Y286 467 aa11.8□□□□□ -0.52
LINC00339-211ENST00000641009 LOC105371242A0A075B767 164 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 A0A1W2PRQ8 180 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 ISPDA4D126 451 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 HAX1O00165 279 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SOCS2O14508 198 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 NDUFAB1O14561 156 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SGCEO43556 437 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SLC16A7O60669 478 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 PTP4A3O75365 173 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 NDUFB2O95178 105 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 VENTXO95231 258 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 ADH4P08319 380 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 COX5BP10606 129 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SDHAP31040 664 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 LIPAP38571 399 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 OMPP47874 163 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SCRN3Q0VDG4 424 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 DGCR6Q14129 220 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SEC23BQ15437 767 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 GLYATQ6IB77 296 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 ARL9Q6T311 187 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-211ENST00000641009 RNF148Q8N7C7 305 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-211ENST00000641009 SLC7A6Q92536 515 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 NDEL1Q9GZM8 345 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 EGLN1Q9GZT9 426 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 NRIP3Q9NQ35 241 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 DCAF16Q9NXF7 216 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 PLEK2Q9NYT0 353 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 CGGBP1Q9UFW8 167 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-211ENST00000641009 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
LINC00339-211ENST00000641009 FAM32AQ9Y421 112 aaKnown RBP11.79□□□□□ -0.52
LINC00339-211ENST00000641009 TRBV4-1A0A0J9YWV2 114 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 AHCYL1O43865 530 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 CD55P08174 381 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 RHCEP18577 417 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 FXYD6P3P58550 94 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 AQP6Q13520 282 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 PTCHD4Q6ZW05 846 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 SEMA6DQ8NFY4 1073 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 OR52J3Q8NH60 311 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 CMTM5Q96DZ9 223 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 RSRC1Q96IZ7 334 aaKnown RBP11.78□□□□□ -0.52
LINC00339-211ENST00000641009 GPX7Q96SL4 187 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-211ENST00000641009 WACQ9BTA9 647 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 TMPRSS13Q9BYE2 586 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 MYLK2Q9H1R3 596 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 SPAG4Q9NPE6 437 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 DCAF13Q9NV06 445 aaKnown RBP11.78□□□□□ -0.52
LINC00339-211ENST00000641009 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 ADA2Q9NZK5 511 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 ASH2LQ9UBL3 628 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 COA3Q9Y2R0 106 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-211ENST00000641009 STARD10Q9Y365 291 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 IER3IP1Q9Y5U9 82 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 V9GYQ6 96 aa11.78□□□□□ -0.52
LINC00339-211ENST00000641009 A0A0G2JMP0 313 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 A0A0X1KG70 313 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 GPANK1O95872 356 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms