RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LIX1Q8N485 282 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 RGP1Q92546 391 aaPredicted RBP2.17□□□□□ -2.06
CCDC7-216ENST00000640058 SEH1LQ96EE3 360 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 CCDC126Q96EE4 140 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 CHP1Q99653 195 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 SLC29A1Q99808 456 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 TMEM185BQ9H7F4 350 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 TMEM165Q9HC07 324 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 VANGL2Q9ULK5 521 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF816-ZNF321PA0A0X1KG74 233 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 SMCO3A2RU48 225 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 F6UB75 175 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 SIRPB1O00241 398 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 NDUFAB1O14561 156 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 PPP1R2P9O14990 202 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 DPM1O60762 260 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 CBR3O75828 277 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 FTH1P02794 183 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 ANXA5P08758 320 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 POLR2MP0CAP2 368 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 RRM2P31350 389 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 GPX4P36969 197 aaPredicted RBP2.16□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF138P52744 262 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 NUTF2P61970 127 aaKnown RBP2.16□□□□□ -2.06
CCDC7-216ENST00000640058 MXD1Q05195 221 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 POU2AF1Q16633 256 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 ALKBH6Q3KRA9 238 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 C22orf42Q6IC83 251 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 HDDC2Q7Z4H3 204 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 OSR2Q8N2R0 312 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 NOXO1Q8NFA2 376 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 OR10J6PQ8NGY7 276 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 NRGNQ92686 78 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 MCUR1Q96AQ8 359 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 CREB3L1Q96BA8 519 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF160Q9HCG1 818 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 RAB20Q9NX57 234 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 KIAA1257Q9ULG3 409 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 PSG8Q9UQ74 426 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 KCNE3Q9Y6H6 103 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 MAPK8IP3Q9UPT6 1336 aa2.16□□□□□ -2.06
CCDC7-216ENST00000640058 NINLQ9Y2I6 1382 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ANKRD12Q6UB98 2062 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 IGLV3-12A0A075B6K2 115 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 A0A075B6Q4 140 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 IGHV3-74A0A0B4J1X5 117 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SGK1O00141 431 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 KMOO15229 486 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 H6PDO95479 791 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 CLIC3O95833 236 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SERPINA5P05154 406 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 GNAO1P09471 354 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF24P17028 368 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 CD34P28906 385 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SLC1A1P43005 524 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 PRRX1P54821 245 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 RPS15P62841 145 aaKnown RBP2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ECH1Q13011 328 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF726P1Q15940 193 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 MRPL23Q16540 153 aaKnown RBP2.15□□□□□ -2.07
CCDC7-216ENST00000640058 PGGHGQ32M88 737 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 HSDL1Q3SXM5 330 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SPANXN2Q5MJ10 180 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ANKRD22Q5VYY1 191 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 TMEM220Q6QAJ8 160 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ABHD13Q7L211 337 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SLC16A14Q7RTX9 510 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 OR4A4PQ8NGN8 299 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 OR2A1Q8NGT9 310 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ZNF502Q8TBZ5 544 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SLC7A13Q8TCU3 470 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 TSEN15Q8WW01 171 aaKnown RBP2.15□□□□□ -2.07
CCDC7-216ENST00000640058 FAM3DQ96BQ1 224 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 SERPINB12Q96P63 405 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 PARP12Q9H0J9 701 aaKnown RBP2.15□□□□□ -2.07
CCDC7-216ENST00000640058 ISYNA1Q9NPH2 558 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 MTCH1Q9NZJ7 389 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 LGALS13Q9UHV8 139 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 PITPNC1Q9UKF7 332 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 GOLT1BQ9Y3E0 138 aa2.15□□□□□ -2.07
CCDC7-216ENST00000640058 MRPS18BQ9Y676 258 aaKnown RBP2.15□□□□□ -2.07
CCDC7-216ENST00000640058 LRRIQ3A6PVS8 624 aaPredicted RBP2.14□□□□□ -2.07
CCDC7-216ENST00000640058 SCAMP2O15127 329 aaKnown RBP2.14□□□□□ -2.07
CCDC7-216ENST00000640058 EIF3HO15372 352 aaKnown RBP eCLIP2.14□□□□□ -2.07
CCDC7-216ENST00000640058 KLHL41O60662 606 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CDH16O75309 829 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CTAG2O75638 210 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 RP2O75695 350 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 AQP8O94778 261 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 RAB3DO95716 219 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CT45A6P0DMU7 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CT45A5P0DMU8 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CT45A7P0DMV0 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 SELENBP1Q13228 472 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 PRPSAP1Q14558 356 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 OR7A5Q15622 319 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 CT45A1Q5HYN5 189 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 HES5Q5TA89 166 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 REEP3Q6NUK4 255 aa2.14□□□□□ -2.07
CCDC7-216ENST00000640058 BIVMQ86UB2 503 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms