RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ZNF295-AS1Q8N0V1 137 aa16.87■□□□□ 0.29
HLA-A-209ENST00000638375 HS3ST6Q96QI5 342 aa16.87■□□□□ 0.29
HLA-A-209ENST00000638375 MOV10Q9HCE1 1003 aaKnown RBP16.87■□□□□ 0.29
HLA-A-209ENST00000638375 PKDREJQ9NTG1 2253 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 UTP20O75691 2785 aaKnown RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 ZNF593O00488 134 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 WBP4O75554 376 aaKnown RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 MRPL3P09001 348 aaKnown RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 SPARCP09486 303 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 CD40P25942 277 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 ISL1P61371 349 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 SPOCK1Q08629 439 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 GGTLC2Q14390 218 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 CCDC92Q53HC0 331 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 MEDAGQ5VYS4 303 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 ZNF787Q6DD87 383 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 ZNF774Q6NX45 483 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 CFAP77Q6ZQR2 320 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 SETD9Q8NE22 299 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 CPEB3Q8NE35 698 aaKnown RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 OR6N2Q8NGY6 317 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 PIK3IP1Q96FE7 263 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 CDADC1Q9BWV3 514 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 HAO2Q9NYQ3 351 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 GDF2Q9UK05 429 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-209ENST00000638375 PTPN13Q12923 2485 aa16.86■□□□□ 0.29
HLA-A-209ENST00000638375 FAM221AA4D161 298 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 SGCEO43556 437 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 SERPINA5P05154 406 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 PTAFRP25105 342 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 NAAAQ02083 359 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 TMEM108Q6UXF1 575 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 VASH1Q7L8A9 365 aaPredicted RBP16.85■□□□□ 0.29
HLA-A-209ENST00000638375 DPY19L4Q7Z388 723 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 GJC3Q8NFK1 279 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 CNIH3Q8TBE1 160 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 SMAP2Q8WU79 429 aaPredicted RBP16.85■□□□□ 0.29
HLA-A-209ENST00000638375 MAP6Q96JE9 813 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 ESRP2Q9H6T0 727 aaKnown RBP16.85■□□□□ 0.29
HLA-A-209ENST00000638375 ADGRL4Q9HBW9 690 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 WARS2Q9UGM6 360 aaKnown RBP16.85■□□□□ 0.29
HLA-A-209ENST00000638375 FBXL3Q9UKT7 428 aa16.85■□□□□ 0.29
HLA-A-209ENST00000638375 DOK2O60496 412 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 APEX1P27695 318 aaKnown RBP16.84■□□□□ 0.29
HLA-A-209ENST00000638375 CALCRP30988 508 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 HSPA13P48723 471 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 NR1H2P55055 460 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 PLP2Q04941 152 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 TMED1Q13445 227 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 SLC16A9Q7RTY1 509 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 DCXRQ7Z4W1 244 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 C8orf59Q8N0T1 100 aaPredicted RBP16.84■□□□□ 0.29
HLA-A-209ENST00000638375 OR10S1Q8NGN2 331 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 OR2AJ1Q8NGZ0 328 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 RFKQ969G6 155 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 CNN2Q99439 309 aaKnown RBP16.84■□□□□ 0.29
HLA-A-209ENST00000638375 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 PNRC2Q9NPJ4 139 aaKnown RBP16.84■□□□□ 0.29
HLA-A-209ENST00000638375 CLN6Q9NWW5 311 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 PLEK2Q9NYT0 353 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 HSPE1-MOB4S4R3N1 261 aa16.84■□□□□ 0.29
HLA-A-209ENST00000638375 IGHV2OR16-5A0A0B4J2B6 119 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 IQCMA0A1B0GVH7 501 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 A0A1W2PPR1 153 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 ABCD4O14678 606 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 SYNGR3O43761 229 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 TMCC2O75069 709 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 APOL3O95236 402 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 GOSR1O95249 250 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 PLAUP00749 431 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 CCL2P13500 99 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 NUDT6P53370 316 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 HCCSP53701 268 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 RAB35Q15286 201 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 SMN1Q16637 294 aaKnown RBP16.83■□□□□ 0.28
HLA-A-209ENST00000638375 TMEM154Q6P9G4 183 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 SHFQ7M4L6 423 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 CDC20BQ86Y33 519 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 SLC30A7Q8NEW0 376 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 OR51G2Q8NGK0 314 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 OTOSQ8NHW6 89 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 ST7LQ8TDW4 575 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 FBLIM1Q8WUP2 373 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 MARVELD3Q96A59 401 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 Q96MT0 163 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 AMELYQ99218 206 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 TMEM204Q9BSN7 226 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.83■□□□□ 0.28
HLA-A-209ENST00000638375 KLHDC2Q9Y2U9 406 aa16.83■□□□□ 0.28
HLA-A-209ENST00000638375 LOC100509620A0A075B734 347 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 OR6C6A6NF89 314 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 CTAG2O75638 210 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 CD3EP07766 207 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 SBK2P0C263 348 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 HTR5AP47898 357 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 ZNF91Q05481 1191 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 EIF2B1Q14232 305 aaKnown RBP16.82■□□□□ 0.28
HLA-A-209ENST00000638375 ELFN2Q5R3F8 820 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
HLA-A-209ENST00000638375 ADAM5Q6NVV9 412 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms