RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NXF2Q9GZY0 626 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 IGHV3-43A0A0B4J1X8 118 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 IGHV3-43DP0DP04 118 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 PRSS12P56730 875 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 ABCC6O95255 1503 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 M0R082 166 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 CACNG3O60359 315 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 AMTP48728 403 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 RAB5CP51148 216 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 OR10A3P58181 314 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 ERHP84090 104 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 MAGT1Q9H0U3 335 aa16.31■□□□□ 0.2
CACNA1A-227ENST00000636549 CST9Q5W186 159 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 MARCH5Q9NX47 278 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 NAP1L6A6NFF2 107 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 YPEL5P62699 121 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 WDR5BQ86VZ2 330 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 MAML2Q8IZL2 1156 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 LYSMD1Q96S90 227 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 HES4Q9HCC6 221 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 ING1Q9UK53 422 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 WFDC5Q8TCV5 224 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC7A6Q92536 515 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 TMEM231Q9H6L2 316 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 KCNIP2Q9NS61 270 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 CD1BP29016 333 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 RANBP10Q6VN20 620 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 Q6ZS52 159 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SFTPA1Q8IWL2 248 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 FBXL6Q8N531 539 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 R3HDMLQ9H3Y0 253 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 C3orf80F5H4A9 247 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 POU3F3P20264 500 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 MAP2K6P52564 334 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 KCTD11Q693B1 232 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 TRUB1Q8WWH5 349 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 ISYNA1Q9NPH2 558 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 TMEM212A6NML5 194 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SULT1C4O75897 302 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 GFERP55789 205 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 HSF1Q00613 529 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 GJC3Q8NFK1 279 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SPPL3Q8TCT6 385 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 MYH1P12882 1939 aa16.3■□□□□ 0.2
CACNA1A-227ENST00000636549 SULT1C2O00338 296 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 HPNP05981 417 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 NAAAQ02083 359 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 NCCRP1Q6ZVX7 275 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 CCDC190Q86UF4 302 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 SLCO2A1Q92959 643 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 MED29Q9NX70 200 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 IL37Q9NZH6 218 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC2A10O95528 541 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 TSPAN12O95859 305 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 FAAP20Q6NZ36 180 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 ZNF251Q9BRH9 671 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 EIF1BO60739 113 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 ZNF252P-AS1Q0IIN9 211 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 IAH1Q2TAA2 248 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 GDF7Q7Z4P5 450 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 LAX1Q8IWV1 398 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 OR2AK2Q8NG84 335 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 SEMA4GQ9NTN9 838 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 RPS23P62266 143 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 C9orf50Q5SZB4 431 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 GPR87Q9BY21 358 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 PLEKHF2Q9H8W4 249 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 UPK1BO75841 260 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 ACP2P11117 423 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 RTL6Q6ICC9 239 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 TMEM135Q86UB9 458 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 RPUSD4Q96CM3 377 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 KIRREL1Q96J84 757 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 ZNF2Q9BSG1 426 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 ABHD14AQ9BUJ0 271 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 COMMD5Q9GZQ3 224 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC25A22Q9H936 323 aa16.29■□□□□ 0.2
CACNA1A-227ENST00000636549 IGKV3D-15A0A087WSY6 115 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 IGKV3-15P01624 115 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 ALKBH1Q13686 389 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 C12orf10Q9HB07 376 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 ZNF230Q9UIE0 474 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 IDSB3KWA1 339 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 SELEP16581 610 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 ARHGEF39Q8N4T4 335 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 BCORP1Q8N888 145 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 CXorf36Q9H7Y0 433 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 ASH2LQ9UBL3 628 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 AGFG2O95081 481 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 IVDP26440 423 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms