RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	GAL3ST1	Q99999	423 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TSGA10	Q9BZW7	698 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NMUR2	Q9GZQ4	415 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SLITRK2	Q9H156	845 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ABCD2	Q9UBJ2	740 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DCDC2	Q9UHG0	476 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	VANGL2	Q9ULK5	521 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MUC6	Q6W4X9	2439 aa		4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HELZ	P42694	1942 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OBSL1	O75147	1896 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MYO16	Q9Y6X6	1858 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GOLGA8O	A6NCC3	632 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAM47DP	A6NHR8	397 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	BTNL10	A8MVZ5	291 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GOLGA8N	F8WBI6	632 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PROSC	O94903	275 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	KLF8	O95600	359 aa	Predicted RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HSPB1	P04792	205 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NUDT1	P36639	197 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NBL1	P41271	181 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SSR1	P43307	286 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SUCLG1	P53597	346 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TPI1	P60174	286 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RPS24	P62847	133 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	KDSR	Q06136	332 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RAD51	Q06609	339 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OXA1L	Q15070	435 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	C9orf129	Q5T035	196 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR52E8	Q6IFG1	317 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RWDD4	Q6NW29	188 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PRSS41	Q7RTY9	318 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NANOGNB	Q7Z5D8	188 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SYCE1	Q8N0S2	351 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	C6orf223	Q8N319	242 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	BBS5	Q8N3I7	341 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RNF10	Q8N5U6	811 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DCAF4L2	Q8NA75	395 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR4K14	Q8NGD5	310 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	JOSD2	Q8TAC2	188 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RAB3IL1	Q8TBN0	382 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	UFD1	Q92890	307 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ISG20	Q96AZ6	181 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAM122A	Q96E09	287 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SEC22A	Q96IW7	307 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RBKS	Q9H477	322 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	NMRAL1	Q9HBL8	299 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SPATA7	Q9P0W8	599 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SLC7A8	Q9UHI5	535 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZNF318	Q5VUA4	2279 aa		4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.37	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PPIAL4E	A0A075B759	164 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GOLGA6L7	A0A1B0GV03	622 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392		A0A1W2PQ67	120 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CYSRT1	A8MQ03	144 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SPOP	O43791	374 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ERLIN1	O75477	346 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CST1	P01037	141 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CRYGB	P07316	175 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RBMY1C	P0DJD4	496 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PPIAL4F	P0DN26	164 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MSN	P26038	577 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CD1C	P29017	333 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MIP	P30301	263 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HSPA9	P38646	679 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CSK	P41240	450 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PKNOX1	P55347	436 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	GNA12	Q03113	381 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TFDP2	Q14188	446 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ARL6IP1	Q15041	203 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SSX2	Q16385	188 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	BCL7A	Q4VC05	210 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	SPINK14	Q6IE38	97 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	C11orf71	Q6IPW1	123 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PGAP1	Q75T13	922 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAM220A	Q7Z4H9	259 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	UMODL1-AS1	Q8N2C9	162 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR10H4	Q8NGA5	316 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	OR8D1	Q8WZ84	308 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	RASD2	Q96D21	266 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CXorf40B	Q96DE9	158 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	CHP1	Q99653	195 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FAIM2	Q9BWQ8	316 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PPA2	Q9H2U2	334 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	EHD1	Q9H4M9	534 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DHX35	Q9H5Z1	703 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	FOLH1B	Q9HBA9	442 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	ZDHHC4	Q9NPG8	344 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	DYRK4	Q9NR20	520 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	THUMPD1	Q9NXG2	353 aa	Known RBP	4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	HS3ST2	Q9Y278	367 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	PEX16	Q9Y5Y5	336 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MUC3A	Q02505	3323 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MIA3	Q5JRA6	1907 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	TICRR	Q7Z2Z1	1910 aa		4.36	□□□□□ -1.71
SMARCA2-240	ENST00000635392	IGHV1OR21-1	A0A087WYE8	117 aa		4.35	□□□□□ -1.71
SMARCA2-240	ENST00000635392	IQANK1	A0A1B0GTG1	560 aa		4.35	□□□□□ -1.71
SMARCA2-240	ENST00000635392	MIF4GD	A9UHW6	222 aa	Known RBP	4.35	□□□□□ -1.71

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