RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
PNKP-223ENST00000629179 MEP1BQ16820 701 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 MICAQ29983 383 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 SPATA46Q5T0L3 261 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.17□□□□□ -0.46
PNKP-223ENST00000629179 OR6V1Q8N148 313 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 AQP11Q8NBQ7 271 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 SDR9C7Q8NEX9 313 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 UBASH3BQ8TF42 649 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 CANT1Q8WVQ1 401 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 WACQ9BTA9 647 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 CHID1Q9BWS9 393 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 FN3KQ9H479 309 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 MYOZ1Q9NP98 299 aaPredicted RBP12.17□□□□□ -0.46
PNKP-223ENST00000629179 RPRD1BQ9NQG5 326 aaKnown RBP12.17□□□□□ -0.46
PNKP-223ENST00000629179 CDH10Q9Y6N8 788 aa12.17□□□□□ -0.46
PNKP-223ENST00000629179 IGLV1-36A0A0B4J1U3 117 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 OR6C68A6NDL8 312 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 AQP12BA6NM10 295 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 NDUFS8O00217 210 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 CD5LO43866 347 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 DOK2O60496 412 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 CST1P01037 141 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 HPXP02790 462 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
PNKP-223ENST00000629179 MPV17P39210 176 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 NR4A2P43354 598 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 HTR5AP47898 357 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 LSM6P62312 80 aaKnown RBP12.16□□□□□ -0.46
PNKP-223ENST00000629179 GLO1Q04760 184 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.16□□□□□ -0.46
PNKP-223ENST00000629179 SCRN3Q0VDG4 424 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 AQP6Q13520 282 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 NKPD1Q17RQ9 610 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 RASSF6Q6ZTQ3 369 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 VASH1Q7L8A9 365 aaPredicted RBP12.16□□□□□ -0.46
PNKP-223ENST00000629179 AQP12AQ8IXF9 295 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 ZNF786Q8N393 782 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 OR52L1Q8NGH7 329 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 OR52E2Q8NGJ4 325 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 ABHD4Q8TB40 342 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 SLC25A40Q8TBP6 338 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 MARS2Q96GW9 593 aaKnown RBP12.16□□□□□ -0.46
PNKP-223ENST00000629179 C4orf45Q96LM5 186 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 SNX18Q96RF0 628 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 IL20Q9NYY1 176 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 ASH2LQ9UBL3 628 aa12.16□□□□□ -0.46
PNKP-223ENST00000629179 DHRS12A0PJE2 317 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 BHLHE40O14503 412 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 RER1O15258 196 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 DNAJC8O75937 253 aaPredicted RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 GAAP10253 952 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 COX5BP10606 129 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 COL8A2P25067 703 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 ERFP50548 548 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 PPP1CBP62140 327 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 PPP2R2BQ00005 443 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 BNIP1Q12981 228 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 FLOT2Q14254 428 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 ZNF718Q3SXZ3 478 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 CCDC92Q53HC0 331 aaPredicted RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 TMEM255AQ5JRV8 349 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 RPL13AP3Q6NVV1 102 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 CYB561A3Q8NBI2 242 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 NPEPL1Q8NDH3 523 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 GTF3AQ92664 365 aaKnown RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 TSSK6Q9BXA6 273 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 DGCR6LQ9BY27 220 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 HINT3Q9NQE9 182 aaKnown RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 SLCO1C1Q9NYB5 712 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 PLEK2Q9NYT0 353 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
PNKP-223ENST00000629179 POMPQ9Y244 141 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 POLR1DQ9Y2S0 133 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 GRIP1Q9Y3R0 1128 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 LHFPL6Q9Y693 200 aa12.15□□□□□ -0.46
PNKP-223ENST00000629179 WNK2Q9Y3S1 2297 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 C17orf100A8MU93 164 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 GSC2O15499 205 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 NCR1O76036 304 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 SOX14O95416 240 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
PNKP-223ENST00000629179 TFP02787 698 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms